Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn1O88551 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn1O88551 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn1O88551 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn1O88551 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn1O88551 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.15■□□□□ 0.5
Cldn1O88551 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.15■□□□□ 0.5
Cldn1O88551 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn1O88551 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn1O88551 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn1O88551 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn1O88551 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cldn1O88551 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cldn1O88551 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.14■□□□□ 0.49
Cldn1O88551 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.14■□□□□ 0.49
Cldn1O88551 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cldn1O88551 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.14■□□□□ 0.49
Cldn1O88551 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn1O88551 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn1O88551 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn1O88551 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn1O88551 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn1O88551 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn1O88551 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Cldn1O88551 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn1O88551 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cldn1O88551 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn1O88551 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn1O88551 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn1O88551 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn1O88551 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn1O88551 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cldn1O88551 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.12■□□□□ 0.49
Cldn1O88551 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn1O88551 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn1O88551 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn1O88551 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn1O88551 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn1O88551 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cldn1O88551 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Cldn1O88551 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn1O88551 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn1O88551 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn1O88551 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn1O88551 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn1O88551 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.11■□□□□ 0.49
Cldn1O88551 Golgb1-201ENSMUST00000023534 498 ntBASIC18.11■□□□□ 0.49
Cldn1O88551 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn1O88551 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn1O88551 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn1O88551 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cldn1O88551 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn1O88551 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn1O88551 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn1O88551 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn1O88551 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn1O88551 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn1O88551 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn1O88551 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.1■□□□□ 0.49
Cldn1O88551 Gm10399-202ENSMUST00000202768 748 ntBASIC18.1■□□□□ 0.49
Cldn1O88551 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn1O88551 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn1O88551 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn1O88551 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn1O88551 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.09■□□□□ 0.49
Cldn1O88551 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn1O88551 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cldn1O88551 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn1O88551 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn1O88551 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn1O88551 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn1O88551 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.09■□□□□ 0.49
Cldn1O88551 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn1O88551 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn1O88551 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn1O88551 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn1O88551 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Cldn1O88551 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn1O88551 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn1O88551 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.08■□□□□ 0.48
Cldn1O88551 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.08■□□□□ 0.48
Cldn1O88551 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Cldn1O88551 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.08■□□□□ 0.48
Cldn1O88551 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cldn1O88551 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Cldn1O88551 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn1O88551 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn1O88551 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cldn1O88551 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.07■□□□□ 0.48
Cldn1O88551 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn1O88551 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cldn1O88551 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn1O88551 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.07■□□□□ 0.48
Cldn1O88551 Gm8495-201ENSMUST00000188740 694 ntBASIC18.07■□□□□ 0.48
Cldn1O88551 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn1O88551 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cldn1O88551 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn1O88551 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn1O88551 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn1O88551 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms