Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops3O88543 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Cops3O88543 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops3O88543 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops3O88543 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops3O88543 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops3O88543 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops3O88543 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops3O88543 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops3O88543 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops3O88543 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops3O88543 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops3O88543 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cops3O88543 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops3O88543 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cops3O88543 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops3O88543 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cops3O88543 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19■□□□□ 0.63
Cops3O88543 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19■□□□□ 0.63
Cops3O88543 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops3O88543 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cops3O88543 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
Cops3O88543 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops3O88543 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cops3O88543 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cops3O88543 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cops3O88543 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cops3O88543 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cops3O88543 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cops3O88543 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.99■□□□□ 0.63
Cops3O88543 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.99■□□□□ 0.63
Cops3O88543 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.99■□□□□ 0.63
Cops3O88543 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cops3O88543 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cops3O88543 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.99■□□□□ 0.63
Cops3O88543 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cops3O88543 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cops3O88543 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cops3O88543 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.98■□□□□ 0.63
Cops3O88543 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.98■□□□□ 0.63
Cops3O88543 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cops3O88543 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cops3O88543 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops3O88543 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops3O88543 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops3O88543 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cops3O88543 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops3O88543 Scarna2-201ENSMUST00000157560 414 ntBASIC18.97■□□□□ 0.63
Cops3O88543 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cops3O88543 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops3O88543 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops3O88543 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cops3O88543 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops3O88543 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops3O88543 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cops3O88543 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops3O88543 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops3O88543 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops3O88543 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops3O88543 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.96■□□□□ 0.63
Cops3O88543 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops3O88543 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops3O88543 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cops3O88543 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops3O88543 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops3O88543 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cops3O88543 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops3O88543 Gm16437-201ENSMUST00000025669 507 ntBASIC18.95■□□□□ 0.62
Cops3O88543 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops3O88543 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops3O88543 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops3O88543 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cops3O88543 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.95■□□□□ 0.62
Cops3O88543 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops3O88543 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cops3O88543 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops3O88543 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops3O88543 Gm9806-201ENSMUST00000051080 552 ntBASIC18.94■□□□□ 0.62
Cops3O88543 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cops3O88543 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cops3O88543 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cops3O88543 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops3O88543 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cops3O88543 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops3O88543 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops3O88543 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cops3O88543 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops3O88543 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cops3O88543 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cops3O88543 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops3O88543 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cops3O88543 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops3O88543 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cops3O88543 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cops3O88543 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cops3O88543 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.92■□□□□ 0.62
Cops3O88543 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops3O88543 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cops3O88543 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Cops3O88543 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms