Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vamp8O70404 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vamp8O70404 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Vamp8O70404 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.04■□□□□ -0
Vamp8O70404 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vamp8O70404 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vamp8O70404 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vamp8O70404 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vamp8O70404 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vamp8O70404 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Vamp8O70404 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vamp8O70404 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Vamp8O70404 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vamp8O70404 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Vamp8O70404 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.03■□□□□ -0
Vamp8O70404 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vamp8O70404 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vamp8O70404 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vamp8O70404 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Vamp8O70404 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Vamp8O70404 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC15.02■□□□□ -0
Vamp8O70404 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vamp8O70404 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vamp8O70404 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Vamp8O70404 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vamp8O70404 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vamp8O70404 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.01□□□□□ -0.01
Vamp8O70404 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vamp8O70404 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.01□□□□□ -0.01
Vamp8O70404 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vamp8O70404 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vamp8O70404 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vamp8O70404 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vamp8O70404 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vamp8O70404 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
Vamp8O70404 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vamp8O70404 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vamp8O70404 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Vamp8O70404 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vamp8O70404 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15□□□□□ -0.01
Vamp8O70404 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Vamp8O70404 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vamp8O70404 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vamp8O70404 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vamp8O70404 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vamp8O70404 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vamp8O70404 Gm17082-201ENSMUST00000166043 1091 ntBASIC14.99□□□□□ -0.01
Vamp8O70404 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC14.99□□□□□ -0.01
Vamp8O70404 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vamp8O70404 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vamp8O70404 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vamp8O70404 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vamp8O70404 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vamp8O70404 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vamp8O70404 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vamp8O70404 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vamp8O70404 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vamp8O70404 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vamp8O70404 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Vamp8O70404 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vamp8O70404 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vamp8O70404 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vamp8O70404 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vamp8O70404 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.97□□□□□ -0.01
Vamp8O70404 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vamp8O70404 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vamp8O70404 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vamp8O70404 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vamp8O70404 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vamp8O70404 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vamp8O70404 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vamp8O70404 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vamp8O70404 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vamp8O70404 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vamp8O70404 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vamp8O70404 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vamp8O70404 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vamp8O70404 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Vamp8O70404 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vamp8O70404 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vamp8O70404 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vamp8O70404 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vamp8O70404 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Vamp8O70404 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Vamp8O70404 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vamp8O70404 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vamp8O70404 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vamp8O70404 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vamp8O70404 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vamp8O70404 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vamp8O70404 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vamp8O70404 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vamp8O70404 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vamp8O70404 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vamp8O70404 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vamp8O70404 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vamp8O70404 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vamp8O70404 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vamp8O70404 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Vamp8O70404 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms