Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pde6dO55057 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6dO55057 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6dO55057 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pde6dO55057 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6dO55057 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6dO55057 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6dO55057 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Pde6dO55057 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
Pde6dO55057 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6dO55057 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pde6dO55057 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pde6dO55057 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6dO55057 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6dO55057 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.76■□□□□ 0.27
Pde6dO55057 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pde6dO55057 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pde6dO55057 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6dO55057 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6dO55057 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6dO55057 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.75■□□□□ 0.27
Pde6dO55057 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6dO55057 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6dO55057 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6dO55057 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pde6dO55057 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pde6dO55057 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6dO55057 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6dO55057 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pde6dO55057 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.74■□□□□ 0.27
Pde6dO55057 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6dO55057 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.74■□□□□ 0.27
Pde6dO55057 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6dO55057 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6dO55057 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6dO55057 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pde6dO55057 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pde6dO55057 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pde6dO55057 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pde6dO55057 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.73■□□□□ 0.27
Pde6dO55057 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pde6dO55057 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pde6dO55057 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6dO55057 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6dO55057 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6dO55057 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6dO55057 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6dO55057 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6dO55057 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6dO55057 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6dO55057 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6dO55057 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.71■□□□□ 0.27
Pde6dO55057 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pde6dO55057 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6dO55057 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6dO55057 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6dO55057 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6dO55057 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6dO55057 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6dO55057 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6dO55057 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.7■□□□□ 0.26
Pde6dO55057 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pde6dO55057 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6dO55057 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6dO55057 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6dO55057 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6dO55057 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Pde6dO55057 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6dO55057 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6dO55057 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6dO55057 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6dO55057 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.69■□□□□ 0.26
Pde6dO55057 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.68■□□□□ 0.26
Pde6dO55057 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Pde6dO55057 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6dO55057 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.68■□□□□ 0.26
Pde6dO55057 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6dO55057 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6dO55057 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pde6dO55057 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6dO55057 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6dO55057 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6dO55057 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6dO55057 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6dO55057 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6dO55057 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6dO55057 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.67■□□□□ 0.26
Pde6dO55057 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6dO55057 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6dO55057 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6dO55057 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6dO55057 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pde6dO55057 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6dO55057 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Pde6dO55057 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6dO55057 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pde6dO55057 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pde6dO55057 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6dO55057 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6dO55057 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms