Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Gm45444-201ENSMUST00000211394 898 ntBASIC18.36■□□□□ 0.53
Atf6bO35451 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atf6bO35451 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Atf6bO35451 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Atf6bO35451 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Atf6bO35451 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.35■□□□□ 0.53
Atf6bO35451 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atf6bO35451 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atf6bO35451 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.35■□□□□ 0.53
Atf6bO35451 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atf6bO35451 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Atf6bO35451 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Atf6bO35451 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Atf6bO35451 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Atf6bO35451 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6bO35451 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6bO35451 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6bO35451 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6bO35451 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Atf6bO35451 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Atf6bO35451 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.34■□□□□ 0.53
Atf6bO35451 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Atf6bO35451 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6bO35451 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6bO35451 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6bO35451 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Atf6bO35451 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.33■□□□□ 0.53
Atf6bO35451 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Atf6bO35451 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atf6bO35451 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf6bO35451 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Atf6bO35451 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf6bO35451 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atf6bO35451 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Atf6bO35451 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf6bO35451 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf6bO35451 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atf6bO35451 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6bO35451 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6bO35451 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6bO35451 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.32■□□□□ 0.52
Atf6bO35451 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6bO35451 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6bO35451 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6bO35451 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atf6bO35451 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Atf6bO35451 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6bO35451 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6bO35451 Gm13238-201ENSMUST00000117655 780 ntBASIC18.31■□□□□ 0.52
Atf6bO35451 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.31■□□□□ 0.52
Atf6bO35451 Gm43566-201ENSMUST00000196851 808 ntBASIC18.31■□□□□ 0.52
Atf6bO35451 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Atf6bO35451 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6bO35451 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Atf6bO35451 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atf6bO35451 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf6bO35451 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atf6bO35451 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Atf6bO35451 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atf6bO35451 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.3■□□□□ 0.52
Atf6bO35451 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Atf6bO35451 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atf6bO35451 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6bO35451 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6bO35451 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6bO35451 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Atf6bO35451 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6bO35451 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6bO35451 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6bO35451 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atf6bO35451 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6bO35451 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Atf6bO35451 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Atf6bO35451 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6bO35451 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6bO35451 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Atf6bO35451 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.28■□□□□ 0.52
Atf6bO35451 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.28■□□□□ 0.52
Atf6bO35451 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6bO35451 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Atf6bO35451 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Atf6bO35451 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6bO35451 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6bO35451 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6bO35451 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atf6bO35451 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Atf6bO35451 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Atf6bO35451 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atf6bO35451 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Atf6bO35451 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atf6bO35451 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.27■□□□□ 0.52
Atf6bO35451 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Atf6bO35451 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6bO35451 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6bO35451 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Atf6bO35451 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Atf6bO35451 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.26■□□□□ 0.51
Atf6bO35451 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6bO35451 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atf6bO35451 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms