Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hps1O08983 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.51■□□□□ 0.71
Hps1O08983 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hps1O08983 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Hps1O08983 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hps1O08983 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.5■□□□□ 0.71
Hps1O08983 Notumos-201ENSMUST00000151998 2659 ntBASIC19.5■□□□□ 0.71
Hps1O08983 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Hps1O08983 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hps1O08983 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hps1O08983 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hps1O08983 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hps1O08983 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hps1O08983 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hps1O08983 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hps1O08983 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hps1O08983 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hps1O08983 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hps1O08983 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Hps1O08983 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Hps1O08983 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hps1O08983 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hps1O08983 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hps1O08983 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hps1O08983 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hps1O08983 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hps1O08983 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hps1O08983 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hps1O08983 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hps1O08983 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Hps1O08983 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.48■□□□□ 0.71
Hps1O08983 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hps1O08983 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hps1O08983 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hps1O08983 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hps1O08983 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hps1O08983 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hps1O08983 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hps1O08983 Gm10420-201ENSMUST00000121713 882 ntBASIC19.47■□□□□ 0.71
Hps1O08983 Gm9812-201ENSMUST00000061934 968 ntBASIC19.47■□□□□ 0.71
Hps1O08983 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hps1O08983 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hps1O08983 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hps1O08983 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Hps1O08983 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hps1O08983 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hps1O08983 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hps1O08983 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.46■□□□□ 0.71
Hps1O08983 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hps1O08983 Gm5921-201ENSMUST00000075898 882 ntBASIC19.46■□□□□ 0.71
Hps1O08983 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hps1O08983 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.45■□□□□ 0.7
Hps1O08983 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Hps1O08983 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hps1O08983 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hps1O08983 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hps1O08983 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.45■□□□□ 0.7
Hps1O08983 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hps1O08983 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Hps1O08983 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.45■□□□□ 0.7
Hps1O08983 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.45■□□□□ 0.7
Hps1O08983 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.44■□□□□ 0.7
Hps1O08983 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hps1O08983 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hps1O08983 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hps1O08983 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hps1O08983 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.44■□□□□ 0.7
Hps1O08983 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hps1O08983 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hps1O08983 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps1O08983 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps1O08983 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps1O08983 Gm15546-201ENSMUST00000122095 826 ntBASIC19.43■□□□□ 0.7
Hps1O08983 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.43■□□□□ 0.7
Hps1O08983 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps1O08983 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hps1O08983 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hps1O08983 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps1O08983 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hps1O08983 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.42■□□□□ 0.7
Hps1O08983 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Hps1O08983 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hps1O08983 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hps1O08983 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hps1O08983 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hps1O08983 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hps1O08983 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hps1O08983 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Hps1O08983 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hps1O08983 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hps1O08983 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hps1O08983 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.41■□□□□ 0.7
Hps1O08983 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hps1O08983 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Hps1O08983 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Hps1O08983 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hps1O08983 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.41■□□□□ 0.7
Hps1O08983 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hps1O08983 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Hps1O08983 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms