Protein–RNA interactions for Protein: O08547

Sec22b, Vesicle-trafficking protein SEC22b, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22bO08547 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
Sec22bO08547 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sec22bO08547 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sec22bO08547 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sec22bO08547 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sec22bO08547 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sec22bO08547 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Sec22bO08547 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.03■□□□□ 0.96
Sec22bO08547 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sec22bO08547 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sec22bO08547 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sec22bO08547 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sec22bO08547 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sec22bO08547 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sec22bO08547 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sec22bO08547 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sec22bO08547 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sec22bO08547 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sec22bO08547 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sec22bO08547 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sec22bO08547 Gm7332-201ENSMUST00000118351 454 ntBASIC21.02■□□□□ 0.96
Sec22bO08547 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sec22bO08547 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sec22bO08547 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sec22bO08547 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Sec22bO08547 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.01■□□□□ 0.95
Sec22bO08547 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sec22bO08547 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.01■□□□□ 0.95
Sec22bO08547 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.01■□□□□ 0.95
Sec22bO08547 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.01■□□□□ 0.95
Sec22bO08547 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Sec22bO08547 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Sec22bO08547 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sec22bO08547 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Sec22bO08547 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sec22bO08547 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sec22bO08547 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec22bO08547 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec22bO08547 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec22bO08547 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sec22bO08547 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec22bO08547 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec22bO08547 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.99■□□□□ 0.95
Sec22bO08547 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec22bO08547 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
Sec22bO08547 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec22bO08547 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec22bO08547 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sec22bO08547 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sec22bO08547 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sec22bO08547 Mir6538-201ENSMUST00000183713 110 ntBASIC20.98■□□□□ 0.95
Sec22bO08547 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sec22bO08547 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.97■□□□□ 0.95
Sec22bO08547 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sec22bO08547 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sec22bO08547 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.97■□□□□ 0.95
Sec22bO08547 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sec22bO08547 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Sec22bO08547 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec22bO08547 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sec22bO08547 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sec22bO08547 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec22bO08547 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec22bO08547 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sec22bO08547 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sec22bO08547 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sec22bO08547 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.95■□□□□ 0.94
Sec22bO08547 Gm12366-201ENSMUST00000121722 873 ntBASIC20.95■□□□□ 0.94
Sec22bO08547 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.95■□□□□ 0.94
Sec22bO08547 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.95■□□□□ 0.94
Sec22bO08547 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.95■□□□□ 0.94
Sec22bO08547 Gm5786-201ENSMUST00000085368 882 ntBASIC20.95■□□□□ 0.94
Sec22bO08547 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Sec22bO08547 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec22bO08547 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Sec22bO08547 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Sec22bO08547 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec22bO08547 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.94■□□□□ 0.94
Sec22bO08547 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.94■□□□□ 0.94
Sec22bO08547 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.94■□□□□ 0.94
Sec22bO08547 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec22bO08547 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sec22bO08547 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec22bO08547 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec22bO08547 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sec22bO08547 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Sec22bO08547 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec22bO08547 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec22bO08547 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec22bO08547 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec22bO08547 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec22bO08547 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec22bO08547 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec22bO08547 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.92■□□□□ 0.94
Sec22bO08547 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec22bO08547 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sec22bO08547 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sec22bO08547 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sec22bO08547 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sec22bO08547 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms