Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn20G5E8X0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cldn20G5E8X0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn20G5E8X0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cldn20G5E8X0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn20G5E8X0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn20G5E8X0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cldn20G5E8X0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn20G5E8X0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn20G5E8X0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cldn20G5E8X0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn20G5E8X0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cldn20G5E8X0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn20G5E8X0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn20G5E8X0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cldn20G5E8X0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn20G5E8X0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn20G5E8X0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cldn20G5E8X0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cldn20G5E8X0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn20G5E8X0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn20G5E8X0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn20G5E8X0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn20G5E8X0 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.41■□□□□ 0.54
Cldn20G5E8X0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn20G5E8X0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn20G5E8X0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn20G5E8X0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn20G5E8X0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cldn20G5E8X0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn20G5E8X0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn20G5E8X0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.4■□□□□ 0.54
Cldn20G5E8X0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn20G5E8X0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cldn20G5E8X0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cldn20G5E8X0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.4■□□□□ 0.54
Cldn20G5E8X0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cldn20G5E8X0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cldn20G5E8X0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cldn20G5E8X0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn20G5E8X0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn20G5E8X0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn20G5E8X0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn20G5E8X0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.39■□□□□ 0.53
Cldn20G5E8X0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.39■□□□□ 0.53
Cldn20G5E8X0 Scarna2-201ENSMUST00000157560 414 ntBASIC18.39■□□□□ 0.53
Cldn20G5E8X0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn20G5E8X0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cldn20G5E8X0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn20G5E8X0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn20G5E8X0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn20G5E8X0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn20G5E8X0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn20G5E8X0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn20G5E8X0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn20G5E8X0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn20G5E8X0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Cldn20G5E8X0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn20G5E8X0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn20G5E8X0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn20G5E8X0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn20G5E8X0 Gm22567-201ENSMUST00000175542 342 ntBASIC18.37■□□□□ 0.53
Cldn20G5E8X0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn20G5E8X0 Terc-201ENSMUST00000082862 423 ntBASIC18.37■□□□□ 0.53
Cldn20G5E8X0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn20G5E8X0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn20G5E8X0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn20G5E8X0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cldn20G5E8X0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cldn20G5E8X0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn20G5E8X0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cldn20G5E8X0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn20G5E8X0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cldn20G5E8X0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn20G5E8X0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn20G5E8X0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn20G5E8X0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn20G5E8X0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.35■□□□□ 0.53
Cldn20G5E8X0 Gm11175-201ENSMUST00000116172 543 ntBASIC18.35■□□□□ 0.53
Cldn20G5E8X0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn20G5E8X0 Gm9806-201ENSMUST00000051080 552 ntBASIC18.35■□□□□ 0.53
Cldn20G5E8X0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cldn20G5E8X0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn20G5E8X0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn20G5E8X0 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.35■□□□□ 0.53
Cldn20G5E8X0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn20G5E8X0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.35■□□□□ 0.53
Cldn20G5E8X0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn20G5E8X0 Gm16437-201ENSMUST00000025669 507 ntBASIC18.34■□□□□ 0.53
Cldn20G5E8X0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn20G5E8X0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn20G5E8X0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn20G5E8X0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn20G5E8X0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn20G5E8X0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn20G5E8X0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.33■□□□□ 0.53
Cldn20G5E8X0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn20G5E8X0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn20G5E8X0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn20G5E8X0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 354 ms