Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atf6F6VAN0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atf6F6VAN0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atf6F6VAN0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atf6F6VAN0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atf6F6VAN0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.9■■□□□ 1.1
Atf6F6VAN0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atf6F6VAN0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Atf6F6VAN0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Atf6F6VAN0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Atf6F6VAN0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Atf6F6VAN0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Atf6F6VAN0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atf6F6VAN0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Atf6F6VAN0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Atf6F6VAN0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Atf6F6VAN0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
Atf6F6VAN0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atf6F6VAN0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.88■■□□□ 1.09
Atf6F6VAN0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atf6F6VAN0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Atf6F6VAN0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Atf6F6VAN0 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.87■■□□□ 1.09
Atf6F6VAN0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Atf6F6VAN0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atf6F6VAN0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Atf6F6VAN0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Atf6F6VAN0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atf6F6VAN0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atf6F6VAN0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atf6F6VAN0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
Atf6F6VAN0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Atf6F6VAN0 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.86■■□□□ 1.09
Atf6F6VAN0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Atf6F6VAN0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Atf6F6VAN0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf6F6VAN0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf6F6VAN0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf6F6VAN0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.85■■□□□ 1.09
Atf6F6VAN0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf6F6VAN0 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.84■■□□□ 1.09
Atf6F6VAN0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atf6F6VAN0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Atf6F6VAN0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.84■■□□□ 1.09
Atf6F6VAN0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atf6F6VAN0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Atf6F6VAN0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Atf6F6VAN0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atf6F6VAN0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.83■■□□□ 1.09
Atf6F6VAN0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Atf6F6VAN0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Atf6F6VAN0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.83■■□□□ 1.08
Atf6F6VAN0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.83■■□□□ 1.08
Atf6F6VAN0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.82■■□□□ 1.08
Atf6F6VAN0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atf6F6VAN0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Atf6F6VAN0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atf6F6VAN0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Atf6F6VAN0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atf6F6VAN0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Atf6F6VAN0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Atf6F6VAN0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atf6F6VAN0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Atf6F6VAN0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Atf6F6VAN0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atf6F6VAN0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atf6F6VAN0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Atf6F6VAN0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atf6F6VAN0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.8■■□□□ 1.08
Atf6F6VAN0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Atf6F6VAN0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Atf6F6VAN0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atf6F6VAN0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atf6F6VAN0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Atf6F6VAN0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.8■■□□□ 1.08
Atf6F6VAN0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Atf6F6VAN0 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.79■■□□□ 1.08
Atf6F6VAN0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Atf6F6VAN0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atf6F6VAN0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atf6F6VAN0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Atf6F6VAN0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atf6F6VAN0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atf6F6VAN0 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.78■■□□□ 1.08
Atf6F6VAN0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.78■■□□□ 1.08
Atf6F6VAN0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atf6F6VAN0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atf6F6VAN0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Atf6F6VAN0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Atf6F6VAN0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Atf6F6VAN0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Atf6F6VAN0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atf6F6VAN0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.75■■□□□ 1.07
Atf6F6VAN0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf6F6VAN0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Atf6F6VAN0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf6F6VAN0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf6F6VAN0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf6F6VAN0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atf6F6VAN0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 531.4 ms