Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm21956-201ENSMUST00000179946 522 ntBASIC25.99■■□□□ 1.75
Ube4aE9Q735 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ube4aE9Q735 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ube4aE9Q735 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ube4aE9Q735 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Ube4aE9Q735 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ube4aE9Q735 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ube4aE9Q735 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ube4aE9Q735 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Ube4aE9Q735 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ube4aE9Q735 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC25.97■■□□□ 1.75
Ube4aE9Q735 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ube4aE9Q735 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Ube4aE9Q735 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Ube4aE9Q735 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC25.96■■□□□ 1.75
Ube4aE9Q735 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Ube4aE9Q735 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Ube4aE9Q735 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ube4aE9Q735 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ube4aE9Q735 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ube4aE9Q735 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Ube4aE9Q735 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Ube4aE9Q735 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC25.95■■□□□ 1.75
Ube4aE9Q735 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
Ube4aE9Q735 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC25.95■■□□□ 1.74
Ube4aE9Q735 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Ube4aE9Q735 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Ube4aE9Q735 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ube4aE9Q735 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Ube4aE9Q735 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
Ube4aE9Q735 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ube4aE9Q735 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
Ube4aE9Q735 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ube4aE9Q735 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ube4aE9Q735 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC25.93■■□□□ 1.74
Ube4aE9Q735 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ube4aE9Q735 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ube4aE9Q735 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Ube4aE9Q735 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC25.92■■□□□ 1.74
Ube4aE9Q735 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ube4aE9Q735 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC25.92■■□□□ 1.74
Ube4aE9Q735 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC25.91■■□□□ 1.74
Ube4aE9Q735 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ube4aE9Q735 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ube4aE9Q735 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ube4aE9Q735 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ube4aE9Q735 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC25.9■■□□□ 1.74
Ube4aE9Q735 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ube4aE9Q735 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ube4aE9Q735 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ube4aE9Q735 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ube4aE9Q735 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Ube4aE9Q735 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Ube4aE9Q735 AC116713.1-201ENSMUST00000215074 430 ntBASIC25.89■■□□□ 1.74
Ube4aE9Q735 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC25.89■■□□□ 1.74
Ube4aE9Q735 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ube4aE9Q735 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Ube4aE9Q735 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC25.88■■□□□ 1.73
Ube4aE9Q735 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ube4aE9Q735 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ube4aE9Q735 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ube4aE9Q735 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ube4aE9Q735 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC25.87■■□□□ 1.73
Ube4aE9Q735 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Ube4aE9Q735 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC25.87■■□□□ 1.73
Ube4aE9Q735 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ube4aE9Q735 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ube4aE9Q735 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Ube4aE9Q735 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ube4aE9Q735 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ube4aE9Q735 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ube4aE9Q735 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
Ube4aE9Q735 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Ube4aE9Q735 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
Ube4aE9Q735 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
Ube4aE9Q735 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ube4aE9Q735 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC25.85■■□□□ 1.73
Ube4aE9Q735 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ube4aE9Q735 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ube4aE9Q735 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC25.84■■□□□ 1.73
Ube4aE9Q735 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC25.84■■□□□ 1.73
Ube4aE9Q735 AC158990.1-201ENSMUST00000221450 2016 ntBASIC25.84■■□□□ 1.73
Ube4aE9Q735 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ube4aE9Q735 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ube4aE9Q735 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ube4aE9Q735 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
Ube4aE9Q735 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ube4aE9Q735 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Ube4aE9Q735 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Ube4aE9Q735 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
Ube4aE9Q735 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC25.83■■□□□ 1.73
Ube4aE9Q735 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ube4aE9Q735 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ube4aE9Q735 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.83■■□□□ 1.72
Ube4aE9Q735 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ube4aE9Q735 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC25.82■■□□□ 1.72
Ube4aE9Q735 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC25.82■■□□□ 1.72
Ube4aE9Q735 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ube4aE9Q735 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Ube4aE9Q735 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC25.81■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms