Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-4A0A0G2JG37 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav9d-4A0A0G2JG37 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9d-4A0A0G2JG37 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav9d-4A0A0G2JG37 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.5□□□□□ -0.09
Trav9d-4A0A0G2JG37 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.5□□□□□ -0.09
Trav9d-4A0A0G2JG37 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav9d-4A0A0G2JG37 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav9d-4A0A0G2JG37 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav9d-4A0A0G2JG37 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9d-4A0A0G2JG37 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9d-4A0A0G2JG37 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9d-4A0A0G2JG37 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav9d-4A0A0G2JG37 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav9d-4A0A0G2JG37 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9d-4A0A0G2JG37 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav9d-4A0A0G2JG37 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9d-4A0A0G2JG37 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9d-4A0A0G2JG37 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.48□□□□□ -0.09
Trav9d-4A0A0G2JG37 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9d-4A0A0G2JG37 Gm6821-201ENSMUST00000107540 542 ntBASIC14.48□□□□□ -0.09
Trav9d-4A0A0G2JG37 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9d-4A0A0G2JG37 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9d-4A0A0G2JG37 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9d-4A0A0G2JG37 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav9d-4A0A0G2JG37 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav9d-4A0A0G2JG37 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.48□□□□□ -0.09
Trav9d-4A0A0G2JG37 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav9d-4A0A0G2JG37 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9d-4A0A0G2JG37 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav9d-4A0A0G2JG37 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9d-4A0A0G2JG37 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9d-4A0A0G2JG37 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav9d-4A0A0G2JG37 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9d-4A0A0G2JG37 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9d-4A0A0G2JG37 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9d-4A0A0G2JG37 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.47□□□□□ -0.09
Trav9d-4A0A0G2JG37 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav9d-4A0A0G2JG37 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9d-4A0A0G2JG37 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav9d-4A0A0G2JG37 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9d-4A0A0G2JG37 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav9d-4A0A0G2JG37 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav9d-4A0A0G2JG37 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9d-4A0A0G2JG37 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9d-4A0A0G2JG37 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9d-4A0A0G2JG37 Gm22567-201ENSMUST00000175542 342 ntBASIC14.46□□□□□ -0.09
Trav9d-4A0A0G2JG37 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav9d-4A0A0G2JG37 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9d-4A0A0G2JG37 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav9d-4A0A0G2JG37 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.46□□□□□ -0.1
Trav9d-4A0A0G2JG37 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav9d-4A0A0G2JG37 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Trav9d-4A0A0G2JG37 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav9d-4A0A0G2JG37 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav9d-4A0A0G2JG37 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trav9d-4A0A0G2JG37 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav9d-4A0A0G2JG37 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav9d-4A0A0G2JG37 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav9d-4A0A0G2JG37 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-4A0A0G2JG37 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trav9d-4A0A0G2JG37 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav9d-4A0A0G2JG37 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav9d-4A0A0G2JG37 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-4A0A0G2JG37 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-4A0A0G2JG37 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav9d-4A0A0G2JG37 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-4A0A0G2JG37 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9d-4A0A0G2JG37 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9d-4A0A0G2JG37 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav9d-4A0A0G2JG37 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9d-4A0A0G2JG37 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9d-4A0A0G2JG37 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9d-4A0A0G2JG37 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9d-4A0A0G2JG37 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav9d-4A0A0G2JG37 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9d-4A0A0G2JG37 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9d-4A0A0G2JG37 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav9d-4A0A0G2JG37 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9d-4A0A0G2JG37 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9d-4A0A0G2JG37 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9d-4A0A0G2JG37 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9d-4A0A0G2JG37 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9d-4A0A0G2JG37 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms