Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav23A0A0G2JG17 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav23A0A0G2JG17 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trav23A0A0G2JG17 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav23A0A0G2JG17 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav23A0A0G2JG17 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav23A0A0G2JG17 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.32■□□□□ 0.36
Trav23A0A0G2JG17 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.32■□□□□ 0.36
Trav23A0A0G2JG17 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav23A0A0G2JG17 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav23A0A0G2JG17 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.32■□□□□ 0.36
Trav23A0A0G2JG17 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav23A0A0G2JG17 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav23A0A0G2JG17 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trav23A0A0G2JG17 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav23A0A0G2JG17 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav23A0A0G2JG17 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav23A0A0G2JG17 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.31■□□□□ 0.36
Trav23A0A0G2JG17 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.31■□□□□ 0.36
Trav23A0A0G2JG17 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trav23A0A0G2JG17 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav23A0A0G2JG17 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav23A0A0G2JG17 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav23A0A0G2JG17 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.31■□□□□ 0.36
Trav23A0A0G2JG17 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav23A0A0G2JG17 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav23A0A0G2JG17 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trav23A0A0G2JG17 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav23A0A0G2JG17 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav23A0A0G2JG17 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.3■□□□□ 0.36
Trav23A0A0G2JG17 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Trav23A0A0G2JG17 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav23A0A0G2JG17 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav23A0A0G2JG17 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav23A0A0G2JG17 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.3■□□□□ 0.36
Trav23A0A0G2JG17 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trav23A0A0G2JG17 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trav23A0A0G2JG17 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav23A0A0G2JG17 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav23A0A0G2JG17 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav23A0A0G2JG17 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav23A0A0G2JG17 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav23A0A0G2JG17 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav23A0A0G2JG17 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav23A0A0G2JG17 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav23A0A0G2JG17 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav23A0A0G2JG17 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav23A0A0G2JG17 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav23A0A0G2JG17 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.28■□□□□ 0.36
Trav23A0A0G2JG17 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav23A0A0G2JG17 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav23A0A0G2JG17 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav23A0A0G2JG17 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav23A0A0G2JG17 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav23A0A0G2JG17 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trav23A0A0G2JG17 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav23A0A0G2JG17 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav23A0A0G2JG17 Gm45444-201ENSMUST00000211394 898 ntBASIC17.26■□□□□ 0.35
Trav23A0A0G2JG17 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trav23A0A0G2JG17 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav23A0A0G2JG17 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav23A0A0G2JG17 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav23A0A0G2JG17 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav23A0A0G2JG17 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav23A0A0G2JG17 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav23A0A0G2JG17 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav23A0A0G2JG17 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav23A0A0G2JG17 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav23A0A0G2JG17 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav23A0A0G2JG17 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav23A0A0G2JG17 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav23A0A0G2JG17 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav23A0A0G2JG17 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav23A0A0G2JG17 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav23A0A0G2JG17 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav23A0A0G2JG17 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav23A0A0G2JG17 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav23A0A0G2JG17 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav23A0A0G2JG17 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav23A0A0G2JG17 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trav23A0A0G2JG17 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav23A0A0G2JG17 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav23A0A0G2JG17 Gm13238-201ENSMUST00000117655 780 ntBASIC17.24■□□□□ 0.35
Trav23A0A0G2JG17 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav23A0A0G2JG17 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav23A0A0G2JG17 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav23A0A0G2JG17 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav23A0A0G2JG17 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav23A0A0G2JG17 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav23A0A0G2JG17 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav23A0A0G2JG17 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trav23A0A0G2JG17 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav23A0A0G2JG17 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
Trav23A0A0G2JG17 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav23A0A0G2JG17 Gm22567-201ENSMUST00000175542 342 ntBASIC17.23■□□□□ 0.35
Trav23A0A0G2JG17 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.23■□□□□ 0.35
Trav23A0A0G2JG17 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav23A0A0G2JG17 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav23A0A0G2JG17 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav23A0A0G2JG17 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms