Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-4A0A0B4J1K2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.99■□□□□ 0.15
Trav9-4A0A0B4J1K2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-4A0A0B4J1K2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-4A0A0B4J1K2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9-4A0A0B4J1K2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9-4A0A0B4J1K2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9-4A0A0B4J1K2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Trav9-4A0A0B4J1K2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav9-4A0A0B4J1K2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav9-4A0A0B4J1K2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav9-4A0A0B4J1K2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav9-4A0A0B4J1K2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav9-4A0A0B4J1K2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9-4A0A0B4J1K2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9-4A0A0B4J1K2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9-4A0A0B4J1K2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9-4A0A0B4J1K2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav9-4A0A0B4J1K2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9-4A0A0B4J1K2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav9-4A0A0B4J1K2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9-4A0A0B4J1K2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9-4A0A0B4J1K2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav9-4A0A0B4J1K2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav9-4A0A0B4J1K2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9-4A0A0B4J1K2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav9-4A0A0B4J1K2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.97■□□□□ 0.15
Trav9-4A0A0B4J1K2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav9-4A0A0B4J1K2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9-4A0A0B4J1K2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9-4A0A0B4J1K2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav9-4A0A0B4J1K2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.96■□□□□ 0.15
Trav9-4A0A0B4J1K2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav9-4A0A0B4J1K2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9-4A0A0B4J1K2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9-4A0A0B4J1K2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9-4A0A0B4J1K2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Trav9-4A0A0B4J1K2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav9-4A0A0B4J1K2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-4A0A0B4J1K2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav9-4A0A0B4J1K2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-4A0A0B4J1K2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-4A0A0B4J1K2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-4A0A0B4J1K2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Trav9-4A0A0B4J1K2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-4A0A0B4J1K2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-4A0A0B4J1K2 Gm45444-201ENSMUST00000211394 898 ntBASIC15.95■□□□□ 0.14
Trav9-4A0A0B4J1K2 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.95■□□□□ 0.14
Trav9-4A0A0B4J1K2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-4A0A0B4J1K2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9-4A0A0B4J1K2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav9-4A0A0B4J1K2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-4A0A0B4J1K2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav9-4A0A0B4J1K2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav9-4A0A0B4J1K2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-4A0A0B4J1K2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav9-4A0A0B4J1K2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-4A0A0B4J1K2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav9-4A0A0B4J1K2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-4A0A0B4J1K2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-4A0A0B4J1K2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9-4A0A0B4J1K2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-4A0A0B4J1K2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-4A0A0B4J1K2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-4A0A0B4J1K2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-4A0A0B4J1K2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-4A0A0B4J1K2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-4A0A0B4J1K2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-4A0A0B4J1K2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-4A0A0B4J1K2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9-4A0A0B4J1K2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav9-4A0A0B4J1K2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.93■□□□□ 0.14
Trav9-4A0A0B4J1K2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav9-4A0A0B4J1K2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9-4A0A0B4J1K2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav9-4A0A0B4J1K2 Gm13238-201ENSMUST00000117655 780 ntBASIC15.92■□□□□ 0.14
Trav9-4A0A0B4J1K2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav9-4A0A0B4J1K2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.92■□□□□ 0.14
Trav9-4A0A0B4J1K2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9-4A0A0B4J1K2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9-4A0A0B4J1K2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav9-4A0A0B4J1K2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9-4A0A0B4J1K2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9-4A0A0B4J1K2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-4A0A0B4J1K2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-4A0A0B4J1K2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Trav9-4A0A0B4J1K2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-4A0A0B4J1K2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-4A0A0B4J1K2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9-4A0A0B4J1K2 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.91■□□□□ 0.14
Trav9-4A0A0B4J1K2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.9■□□□□ 0.14
Trav9-4A0A0B4J1K2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
Trav9-4A0A0B4J1K2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-4A0A0B4J1K2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-4A0A0B4J1K2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Trav9-4A0A0B4J1K2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-4A0A0B4J1K2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-4A0A0B4J1K2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav9-4A0A0B4J1K2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9-4A0A0B4J1K2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms