Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv5A0A0B4J1G9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trbv5A0A0B4J1G9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv5A0A0B4J1G9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv5A0A0B4J1G9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv5A0A0B4J1G9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Trbv5A0A0B4J1G9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv5A0A0B4J1G9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv5A0A0B4J1G9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv5A0A0B4J1G9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv5A0A0B4J1G9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv5A0A0B4J1G9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trbv5A0A0B4J1G9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv5A0A0B4J1G9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trbv5A0A0B4J1G9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv5A0A0B4J1G9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.08■□□□□ 0.32
Trbv5A0A0B4J1G9 Iqck-206ENSMUST00000208658 2891 ntBASIC17.08■□□□□ 0.32
Trbv5A0A0B4J1G9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv5A0A0B4J1G9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv5A0A0B4J1G9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trbv5A0A0B4J1G9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.07■□□□□ 0.32
Trbv5A0A0B4J1G9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv5A0A0B4J1G9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv5A0A0B4J1G9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv5A0A0B4J1G9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv5A0A0B4J1G9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trbv5A0A0B4J1G9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trbv5A0A0B4J1G9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.07■□□□□ 0.32
Trbv5A0A0B4J1G9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.07■□□□□ 0.32
Trbv5A0A0B4J1G9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trbv5A0A0B4J1G9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv5A0A0B4J1G9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv5A0A0B4J1G9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv5A0A0B4J1G9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.06■□□□□ 0.32
Trbv5A0A0B4J1G9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv5A0A0B4J1G9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv5A0A0B4J1G9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv5A0A0B4J1G9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.05■□□□□ 0.32
Trbv5A0A0B4J1G9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv5A0A0B4J1G9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv5A0A0B4J1G9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv5A0A0B4J1G9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv5A0A0B4J1G9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trbv5A0A0B4J1G9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv5A0A0B4J1G9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.04■□□□□ 0.32
Trbv5A0A0B4J1G9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv5A0A0B4J1G9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trbv5A0A0B4J1G9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv5A0A0B4J1G9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv5A0A0B4J1G9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv5A0A0B4J1G9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv5A0A0B4J1G9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv5A0A0B4J1G9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv5A0A0B4J1G9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv5A0A0B4J1G9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv5A0A0B4J1G9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv5A0A0B4J1G9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv5A0A0B4J1G9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv5A0A0B4J1G9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv5A0A0B4J1G9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Trbv5A0A0B4J1G9 Nkain2-201ENSMUST00000092602 558 ntBASIC17.03■□□□□ 0.32
Trbv5A0A0B4J1G9 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.03■□□□□ 0.32
Trbv5A0A0B4J1G9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv5A0A0B4J1G9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trbv5A0A0B4J1G9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv5A0A0B4J1G9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trbv5A0A0B4J1G9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv5A0A0B4J1G9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Trbv5A0A0B4J1G9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trbv5A0A0B4J1G9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trbv5A0A0B4J1G9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv5A0A0B4J1G9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv5A0A0B4J1G9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv5A0A0B4J1G9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trbv5A0A0B4J1G9 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.01■□□□□ 0.31
Trbv5A0A0B4J1G9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv5A0A0B4J1G9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17■□□□□ 0.31
Trbv5A0A0B4J1G9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv5A0A0B4J1G9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv5A0A0B4J1G9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trbv5A0A0B4J1G9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv5A0A0B4J1G9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv5A0A0B4J1G9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trbv5A0A0B4J1G9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv5A0A0B4J1G9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trbv5A0A0B4J1G9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv5A0A0B4J1G9 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.99■□□□□ 0.31
Trbv5A0A0B4J1G9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.99■□□□□ 0.31
Trbv5A0A0B4J1G9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.99■□□□□ 0.31
Trbv5A0A0B4J1G9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv5A0A0B4J1G9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv5A0A0B4J1G9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv5A0A0B4J1G9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trbv5A0A0B4J1G9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv5A0A0B4J1G9 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.99■□□□□ 0.31
Trbv5A0A0B4J1G9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trbv5A0A0B4J1G9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv5A0A0B4J1G9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms