Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-42A0A0A6YY38 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv1-42A0A0A6YY38 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv1-42A0A0A6YY38 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv1-42A0A0A6YY38 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv1-42A0A0A6YY38 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv1-42A0A0A6YY38 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv1-42A0A0A6YY38 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv1-42A0A0A6YY38 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv1-42A0A0A6YY38 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv1-42A0A0A6YY38 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ighv1-42A0A0A6YY38 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.83■□□□□ 0.77
Ighv1-42A0A0A6YY38 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.83■□□□□ 0.77
Ighv1-42A0A0A6YY38 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ighv1-42A0A0A6YY38 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ighv1-42A0A0A6YY38 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ighv1-42A0A0A6YY38 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ighv1-42A0A0A6YY38 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ighv1-42A0A0A6YY38 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ighv1-42A0A0A6YY38 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ighv1-42A0A0A6YY38 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.82■□□□□ 0.76
Ighv1-42A0A0A6YY38 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ighv1-42A0A0A6YY38 Gm13241-201ENSMUST00000094493 780 ntBASIC19.82■□□□□ 0.76
Ighv1-42A0A0A6YY38 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ighv1-42A0A0A6YY38 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv1-42A0A0A6YY38 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv1-42A0A0A6YY38 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv1-42A0A0A6YY38 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.81■□□□□ 0.76
Ighv1-42A0A0A6YY38 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv1-42A0A0A6YY38 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.8■□□□□ 0.76
Ighv1-42A0A0A6YY38 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.8■□□□□ 0.76
Ighv1-42A0A0A6YY38 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-42A0A0A6YY38 Gm9847-201ENSMUST00000052528 599 ntBASIC19.8■□□□□ 0.76
Ighv1-42A0A0A6YY38 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-42A0A0A6YY38 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-42A0A0A6YY38 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-42A0A0A6YY38 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-42A0A0A6YY38 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-42A0A0A6YY38 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-42A0A0A6YY38 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-42A0A0A6YY38 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ighv1-42A0A0A6YY38 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-42A0A0A6YY38 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-42A0A0A6YY38 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-42A0A0A6YY38 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.78■□□□□ 0.76
Ighv1-42A0A0A6YY38 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-42A0A0A6YY38 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-42A0A0A6YY38 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ighv1-42A0A0A6YY38 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-42A0A0A6YY38 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ighv1-42A0A0A6YY38 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Ighv1-42A0A0A6YY38 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ighv1-42A0A0A6YY38 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ighv1-42A0A0A6YY38 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ighv1-42A0A0A6YY38 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ighv1-42A0A0A6YY38 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-42A0A0A6YY38 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-42A0A0A6YY38 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-42A0A0A6YY38 Gm12922-201ENSMUST00000120626 809 ntBASIC19.76■□□□□ 0.75
Ighv1-42A0A0A6YY38 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-42A0A0A6YY38 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.76■□□□□ 0.75
Ighv1-42A0A0A6YY38 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-42A0A0A6YY38 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ighv1-42A0A0A6YY38 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.75■□□□□ 0.75
Ighv1-42A0A0A6YY38 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-42A0A0A6YY38 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-42A0A0A6YY38 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-42A0A0A6YY38 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
Ighv1-42A0A0A6YY38 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-42A0A0A6YY38 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.75■□□□□ 0.75
Ighv1-42A0A0A6YY38 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-42A0A0A6YY38 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-42A0A0A6YY38 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.74■□□□□ 0.75
Ighv1-42A0A0A6YY38 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-42A0A0A6YY38 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-42A0A0A6YY38 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-42A0A0A6YY38 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.74■□□□□ 0.75
Ighv1-42A0A0A6YY38 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-42A0A0A6YY38 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ighv1-42A0A0A6YY38 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-42A0A0A6YY38 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Ighv1-42A0A0A6YY38 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-42A0A0A6YY38 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ighv1-42A0A0A6YY38 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-42A0A0A6YY38 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-42A0A0A6YY38 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-42A0A0A6YY38 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-42A0A0A6YY38 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.73■□□□□ 0.75
Ighv1-42A0A0A6YY38 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ighv1-42A0A0A6YY38 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-42A0A0A6YY38 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-42A0A0A6YY38 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-42A0A0A6YY38 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-42A0A0A6YY38 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-42A0A0A6YY38 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-42A0A0A6YY38 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.72■□□□□ 0.75
Ighv1-42A0A0A6YY38 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-42A0A0A6YY38 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ighv1-42A0A0A6YY38 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-42A0A0A6YY38 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms