Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav12n-2A0A075B626 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav12n-2A0A075B626 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav12n-2A0A075B626 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.2■□□□□ 0.66
Trav12n-2A0A075B626 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav12n-2A0A075B626 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.19■□□□□ 0.66
Trav12n-2A0A075B626 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.19■□□□□ 0.66
Trav12n-2A0A075B626 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav12n-2A0A075B626 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav12n-2A0A075B626 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav12n-2A0A075B626 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Trav12n-2A0A075B626 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.19■□□□□ 0.66
Trav12n-2A0A075B626 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Trav12n-2A0A075B626 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trav12n-2A0A075B626 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trav12n-2A0A075B626 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav12n-2A0A075B626 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12n-2A0A075B626 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12n-2A0A075B626 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.18■□□□□ 0.66
Trav12n-2A0A075B626 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12n-2A0A075B626 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.18■□□□□ 0.66
Trav12n-2A0A075B626 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Trav12n-2A0A075B626 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12n-2A0A075B626 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trav12n-2A0A075B626 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12n-2A0A075B626 Gm5812-201ENSMUST00000061073 957 ntBASIC19.18■□□□□ 0.66
Trav12n-2A0A075B626 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12n-2A0A075B626 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12n-2A0A075B626 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav12n-2A0A075B626 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav12n-2A0A075B626 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trav12n-2A0A075B626 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.17■□□□□ 0.66
Trav12n-2A0A075B626 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trav12n-2A0A075B626 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12n-2A0A075B626 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12n-2A0A075B626 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.16■□□□□ 0.66
Trav12n-2A0A075B626 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.16■□□□□ 0.66
Trav12n-2A0A075B626 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12n-2A0A075B626 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.16■□□□□ 0.66
Trav12n-2A0A075B626 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12n-2A0A075B626 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12n-2A0A075B626 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trav12n-2A0A075B626 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12n-2A0A075B626 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12n-2A0A075B626 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trav12n-2A0A075B626 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12n-2A0A075B626 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12n-2A0A075B626 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.15■□□□□ 0.66
Trav12n-2A0A075B626 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trav12n-2A0A075B626 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12n-2A0A075B626 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12n-2A0A075B626 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Trav12n-2A0A075B626 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav12n-2A0A075B626 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.14■□□□□ 0.65
Trav12n-2A0A075B626 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav12n-2A0A075B626 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Trav12n-2A0A075B626 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav12n-2A0A075B626 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav12n-2A0A075B626 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav12n-2A0A075B626 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav12n-2A0A075B626 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.14■□□□□ 0.65
Trav12n-2A0A075B626 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trav12n-2A0A075B626 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav12n-2A0A075B626 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav12n-2A0A075B626 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav12n-2A0A075B626 Gm10232-201ENSMUST00000089221 720 ntBASIC19.13■□□□□ 0.65
Trav12n-2A0A075B626 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav12n-2A0A075B626 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav12n-2A0A075B626 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Trav12n-2A0A075B626 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav12n-2A0A075B626 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav12n-2A0A075B626 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trav12n-2A0A075B626 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trav12n-2A0A075B626 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.11■□□□□ 0.65
Trav12n-2A0A075B626 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav12n-2A0A075B626 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav12n-2A0A075B626 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav12n-2A0A075B626 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav12n-2A0A075B626 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav12n-2A0A075B626 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav12n-2A0A075B626 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.09■□□□□ 0.65
Trav12n-2A0A075B626 Gm15546-201ENSMUST00000122095 826 ntBASIC19.09■□□□□ 0.65
Trav12n-2A0A075B626 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Trav12n-2A0A075B626 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav12n-2A0A075B626 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav12n-2A0A075B626 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms