Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-1A0A075B5Z8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-1A0A075B5Z8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.14■□□□□ 0.33
Trav6-1A0A075B5Z8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-1A0A075B5Z8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav6-1A0A075B5Z8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-1A0A075B5Z8 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.13■□□□□ 0.33
Trav6-1A0A075B5Z8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.13■□□□□ 0.33
Trav6-1A0A075B5Z8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-1A0A075B5Z8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Trav6-1A0A075B5Z8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-1A0A075B5Z8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-1A0A075B5Z8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-1A0A075B5Z8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-1A0A075B5Z8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-1A0A075B5Z8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-1A0A075B5Z8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Trav6-1A0A075B5Z8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-1A0A075B5Z8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-1A0A075B5Z8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-1A0A075B5Z8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-1A0A075B5Z8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav6-1A0A075B5Z8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-1A0A075B5Z8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-1A0A075B5Z8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav6-1A0A075B5Z8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-1A0A075B5Z8 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.11■□□□□ 0.33
Trav6-1A0A075B5Z8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-1A0A075B5Z8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav6-1A0A075B5Z8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-1A0A075B5Z8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav6-1A0A075B5Z8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav6-1A0A075B5Z8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trav6-1A0A075B5Z8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.1■□□□□ 0.33
Trav6-1A0A075B5Z8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-1A0A075B5Z8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-1A0A075B5Z8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-1A0A075B5Z8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trav6-1A0A075B5Z8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-1A0A075B5Z8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-1A0A075B5Z8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-1A0A075B5Z8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-1A0A075B5Z8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-1A0A075B5Z8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav6-1A0A075B5Z8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav6-1A0A075B5Z8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-1A0A075B5Z8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-1A0A075B5Z8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-1A0A075B5Z8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-1A0A075B5Z8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-1A0A075B5Z8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-1A0A075B5Z8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Trav6-1A0A075B5Z8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6-1A0A075B5Z8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6-1A0A075B5Z8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6-1A0A075B5Z8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trav6-1A0A075B5Z8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-1A0A075B5Z8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-1A0A075B5Z8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trav6-1A0A075B5Z8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-1A0A075B5Z8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-1A0A075B5Z8 Notumos-201ENSMUST00000151998 2659 ntBASIC17.07■□□□□ 0.32
Trav6-1A0A075B5Z8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-1A0A075B5Z8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-1A0A075B5Z8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-1A0A075B5Z8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-1A0A075B5Z8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trav6-1A0A075B5Z8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-1A0A075B5Z8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-1A0A075B5Z8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-1A0A075B5Z8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-1A0A075B5Z8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-1A0A075B5Z8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.06■□□□□ 0.32
Trav6-1A0A075B5Z8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-1A0A075B5Z8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-1A0A075B5Z8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-1A0A075B5Z8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-1A0A075B5Z8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-1A0A075B5Z8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-1A0A075B5Z8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav6-1A0A075B5Z8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-1A0A075B5Z8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-1A0A075B5Z8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-1A0A075B5Z8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-1A0A075B5Z8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 142.6 ms