Protein–RNA interactions for Protein: Q9QZS8

Sh2d3c, SH2 domain-containing protein 3C, mousemouse

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d3cQ9QZS8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh2d3cQ9QZS8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Sh2d3cQ9QZS8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sh2d3cQ9QZS8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh2d3cQ9QZS8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh2d3cQ9QZS8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sh2d3cQ9QZS8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh2d3cQ9QZS8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sh2d3cQ9QZS8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Sh2d3cQ9QZS8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh2d3cQ9QZS8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sh2d3cQ9QZS8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Sh2d3cQ9QZS8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh2d3cQ9QZS8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh2d3cQ9QZS8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Sh2d3cQ9QZS8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh2d3cQ9QZS8 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.79■□□□□ 0.92
Sh2d3cQ9QZS8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh2d3cQ9QZS8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Sh2d3cQ9QZS8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.79■□□□□ 0.92
Sh2d3cQ9QZS8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh2d3cQ9QZS8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Sh2d3cQ9QZS8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Sh2d3cQ9QZS8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sh2d3cQ9QZS8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.77■□□□□ 0.92
Sh2d3cQ9QZS8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh2d3cQ9QZS8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh2d3cQ9QZS8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh2d3cQ9QZS8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Sh2d3cQ9QZS8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sh2d3cQ9QZS8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh2d3cQ9QZS8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.77■□□□□ 0.92
Sh2d3cQ9QZS8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sh2d3cQ9QZS8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sh2d3cQ9QZS8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sh2d3cQ9QZS8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sh2d3cQ9QZS8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sh2d3cQ9QZS8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d3cQ9QZS8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d3cQ9QZS8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
Sh2d3cQ9QZS8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Sh2d3cQ9QZS8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Sh2d3cQ9QZS8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d3cQ9QZS8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d3cQ9QZS8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d3cQ9QZS8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d3cQ9QZS8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d3cQ9QZS8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sh2d3cQ9QZS8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh2d3cQ9QZS8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh2d3cQ9QZS8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Sh2d3cQ9QZS8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh2d3cQ9QZS8 Gm37136-201ENSMUST00000194368 194 ntBASIC20.74■□□□□ 0.91
Sh2d3cQ9QZS8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh2d3cQ9QZS8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh2d3cQ9QZS8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.73■□□□□ 0.91
Sh2d3cQ9QZS8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh2d3cQ9QZS8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.72■□□□□ 0.91
Sh2d3cQ9QZS8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh2d3cQ9QZS8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d3cQ9QZS8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d3cQ9QZS8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d3cQ9QZS8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d3cQ9QZS8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d3cQ9QZS8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh2d3cQ9QZS8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh2d3cQ9QZS8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sh2d3cQ9QZS8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh2d3cQ9QZS8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh2d3cQ9QZS8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d3cQ9QZS8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d3cQ9QZS8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d3cQ9QZS8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Sh2d3cQ9QZS8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh2d3cQ9QZS8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh2d3cQ9QZS8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh2d3cQ9QZS8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh2d3cQ9QZS8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh2d3cQ9QZS8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh2d3cQ9QZS8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.68■□□□□ 0.9
Sh2d3cQ9QZS8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh2d3cQ9QZS8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh2d3cQ9QZS8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sh2d3cQ9QZS8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Sh2d3cQ9QZS8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d3cQ9QZS8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d3cQ9QZS8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d3cQ9QZS8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d3cQ9QZS8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.67■□□□□ 0.9
Sh2d3cQ9QZS8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d3cQ9QZS8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d3cQ9QZS8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh2d3cQ9QZS8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Sh2d3cQ9QZS8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.66■□□□□ 0.9
Sh2d3cQ9QZS8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sh2d3cQ9QZS8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sh2d3cQ9QZS8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh2d3cQ9QZS8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh2d3cQ9QZS8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh2d3cQ9QZS8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms