Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Hmgn3Q9DCB1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn3Q9DCB1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Hmgn3Q9DCB1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
Hmgn3Q9DCB1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn3Q9DCB1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn3Q9DCB1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn3Q9DCB1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn3Q9DCB1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn3Q9DCB1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Hmgn3Q9DCB1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Hmgn3Q9DCB1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn3Q9DCB1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn3Q9DCB1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn3Q9DCB1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn3Q9DCB1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Hmgn3Q9DCB1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.12■□□□□ 0.81
Hmgn3Q9DCB1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn3Q9DCB1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.12■□□□□ 0.81
Hmgn3Q9DCB1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.12■□□□□ 0.81
Hmgn3Q9DCB1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Hmgn3Q9DCB1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hmgn3Q9DCB1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgn3Q9DCB1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgn3Q9DCB1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgn3Q9DCB1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgn3Q9DCB1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgn3Q9DCB1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgn3Q9DCB1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Hmgn3Q9DCB1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgn3Q9DCB1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmgn3Q9DCB1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Hmgn3Q9DCB1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn3Q9DCB1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn3Q9DCB1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn3Q9DCB1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.1■□□□□ 0.81
Hmgn3Q9DCB1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn3Q9DCB1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Hmgn3Q9DCB1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn3Q9DCB1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmgn3Q9DCB1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgn3Q9DCB1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgn3Q9DCB1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmgn3Q9DCB1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Hmgn3Q9DCB1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmgn3Q9DCB1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmgn3Q9DCB1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Hmgn3Q9DCB1 Nkain2-201ENSMUST00000092602 558 ntBASIC20.08■□□□□ 0.81
Hmgn3Q9DCB1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgn3Q9DCB1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Hmgn3Q9DCB1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgn3Q9DCB1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmgn3Q9DCB1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn3Q9DCB1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn3Q9DCB1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn3Q9DCB1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn3Q9DCB1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn3Q9DCB1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn3Q9DCB1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn3Q9DCB1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmgn3Q9DCB1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn3Q9DCB1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hmgn3Q9DCB1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn3Q9DCB1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn3Q9DCB1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Hmgn3Q9DCB1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn3Q9DCB1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn3Q9DCB1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmgn3Q9DCB1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn3Q9DCB1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn3Q9DCB1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn3Q9DCB1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn3Q9DCB1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Hmgn3Q9DCB1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn3Q9DCB1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmgn3Q9DCB1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn3Q9DCB1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn3Q9DCB1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn3Q9DCB1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn3Q9DCB1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn3Q9DCB1 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.04■□□□□ 0.8
Hmgn3Q9DCB1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn3Q9DCB1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn3Q9DCB1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.04■□□□□ 0.8
Hmgn3Q9DCB1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmgn3Q9DCB1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hmgn3Q9DCB1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Hmgn3Q9DCB1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hmgn3Q9DCB1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmgn3Q9DCB1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hmgn3Q9DCB1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.02■□□□□ 0.8
Hmgn3Q9DCB1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.02■□□□□ 0.8
Hmgn3Q9DCB1 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.02■□□□□ 0.8
Hmgn3Q9DCB1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmgn3Q9DCB1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Hmgn3Q9DCB1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.02■□□□□ 0.79
Hmgn3Q9DCB1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Hmgn3Q9DCB1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn3Q9DCB1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn3Q9DCB1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 128.1 ms