Protein–RNA interactions for Protein: Q9CXE0

Prdm5, PR domain zinc finger protein 5, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm5Q9CXE0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm5Q9CXE0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.21■□□□□ 0.83
Prdm5Q9CXE0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Prdm5Q9CXE0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm5Q9CXE0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Prdm5Q9CXE0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prdm5Q9CXE0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Prdm5Q9CXE0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm5Q9CXE0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Prdm5Q9CXE0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm5Q9CXE0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm5Q9CXE0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.2■□□□□ 0.82
Prdm5Q9CXE0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm5Q9CXE0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.2■□□□□ 0.82
Prdm5Q9CXE0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Prdm5Q9CXE0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm5Q9CXE0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm5Q9CXE0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm5Q9CXE0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm5Q9CXE0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prdm5Q9CXE0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm5Q9CXE0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm5Q9CXE0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm5Q9CXE0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm5Q9CXE0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Prdm5Q9CXE0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm5Q9CXE0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prdm5Q9CXE0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Prdm5Q9CXE0 Gm10420-201ENSMUST00000121713 882 ntBASIC20.18■□□□□ 0.82
Prdm5Q9CXE0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prdm5Q9CXE0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prdm5Q9CXE0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Prdm5Q9CXE0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prdm5Q9CXE0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prdm5Q9CXE0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prdm5Q9CXE0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prdm5Q9CXE0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.17■□□□□ 0.82
Prdm5Q9CXE0 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.17■□□□□ 0.82
Prdm5Q9CXE0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.17■□□□□ 0.82
Prdm5Q9CXE0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Prdm5Q9CXE0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.17■□□□□ 0.82
Prdm5Q9CXE0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prdm5Q9CXE0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Prdm5Q9CXE0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.16■□□□□ 0.82
Prdm5Q9CXE0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Prdm5Q9CXE0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Prdm5Q9CXE0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Prdm5Q9CXE0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.16■□□□□ 0.82
Prdm5Q9CXE0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Prdm5Q9CXE0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Prdm5Q9CXE0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Prdm5Q9CXE0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prdm5Q9CXE0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prdm5Q9CXE0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Prdm5Q9CXE0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Prdm5Q9CXE0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prdm5Q9CXE0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prdm5Q9CXE0 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.15■□□□□ 0.82
Prdm5Q9CXE0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Prdm5Q9CXE0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prdm5Q9CXE0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Prdm5Q9CXE0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prdm5Q9CXE0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prdm5Q9CXE0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prdm5Q9CXE0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.14■□□□□ 0.81
Prdm5Q9CXE0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.14■□□□□ 0.81
Prdm5Q9CXE0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.14■□□□□ 0.81
Prdm5Q9CXE0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prdm5Q9CXE0 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.14■□□□□ 0.81
Prdm5Q9CXE0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prdm5Q9CXE0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prdm5Q9CXE0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prdm5Q9CXE0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Prdm5Q9CXE0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prdm5Q9CXE0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Prdm5Q9CXE0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prdm5Q9CXE0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Prdm5Q9CXE0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prdm5Q9CXE0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prdm5Q9CXE0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Prdm5Q9CXE0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.12■□□□□ 0.81
Prdm5Q9CXE0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.12■□□□□ 0.81
Prdm5Q9CXE0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prdm5Q9CXE0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Prdm5Q9CXE0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prdm5Q9CXE0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Prdm5Q9CXE0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Prdm5Q9CXE0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Prdm5Q9CXE0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prdm5Q9CXE0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prdm5Q9CXE0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prdm5Q9CXE0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Prdm5Q9CXE0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prdm5Q9CXE0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Prdm5Q9CXE0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Prdm5Q9CXE0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Prdm5Q9CXE0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prdm5Q9CXE0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.09■□□□□ 0.81
Prdm5Q9CXE0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prdm5Q9CXE0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms