Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q9CR55 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q9CR55 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q9CR55 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Q9CR55 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q9CR55 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Q9CR55 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Q9CR55 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Q9CR55 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Q9CR55 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q9CR55 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.7■□□□□ 0.74
Q9CR55 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Q9CR55 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Q9CR55 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CR55 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9CR55 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9CR55 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Q9CR55 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9CR55 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q9CR55 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9CR55 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.68■□□□□ 0.74
Q9CR55 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.68■□□□□ 0.74
Q9CR55 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q9CR55 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9CR55 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.68■□□□□ 0.74
Q9CR55 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q9CR55 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9CR55 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.67■□□□□ 0.74
Q9CR55 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.67■□□□□ 0.74
Q9CR55 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Q9CR55 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Q9CR55 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Q9CR55 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9CR55 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9CR55 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Q9CR55 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9CR55 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9CR55 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Q9CR55 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.66■□□□□ 0.74
Q9CR55 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9CR55 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9CR55 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.66■□□□□ 0.74
Q9CR55 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Q9CR55 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9CR55 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CR55 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.65■□□□□ 0.74
Q9CR55 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Q9CR55 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q9CR55 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Q9CR55 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Q9CR55 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q9CR55 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CR55 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Q9CR55 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CR55 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CR55 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CR55 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CR55 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CR55 Particl-201ENSMUST00000205370 1560 ntBASIC19.62■□□□□ 0.73
Q9CR55 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CR55 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CR55 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CR55 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9CR55 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Q9CR55 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CR55 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Q9CR55 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.61■□□□□ 0.73
Q9CR55 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.61■□□□□ 0.73
Q9CR55 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CR55 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CR55 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CR55 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CR55 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CR55 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.59■□□□□ 0.73
Q9CR55 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CR55 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CR55 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CR55 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CR55 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.59■□□□□ 0.73
Q9CR55 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Q9CR55 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CR55 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CR55 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Q9CR55 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Q9CR55 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Q9CR55 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms