Protein–RNA interactions for Protein: Q9CR22

Tmem42, Transmembrane protein 42, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem42Q9CR22 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem42Q9CR22 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Tmem42Q9CR22 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem42Q9CR22 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem42Q9CR22 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem42Q9CR22 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tmem42Q9CR22 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem42Q9CR22 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem42Q9CR22 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem42Q9CR22 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Tmem42Q9CR22 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.65■□□□□ 0.58
Tmem42Q9CR22 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Tmem42Q9CR22 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tmem42Q9CR22 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.64■□□□□ 0.57
Tmem42Q9CR22 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tmem42Q9CR22 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tmem42Q9CR22 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tmem42Q9CR22 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem42Q9CR22 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Tmem42Q9CR22 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem42Q9CR22 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Tmem42Q9CR22 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.63■□□□□ 0.57
Tmem42Q9CR22 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem42Q9CR22 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem42Q9CR22 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem42Q9CR22 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Tmem42Q9CR22 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem42Q9CR22 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem42Q9CR22 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem42Q9CR22 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem42Q9CR22 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem42Q9CR22 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem42Q9CR22 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem42Q9CR22 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Tmem42Q9CR22 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.62■□□□□ 0.57
Tmem42Q9CR22 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem42Q9CR22 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem42Q9CR22 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Tmem42Q9CR22 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem42Q9CR22 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem42Q9CR22 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem42Q9CR22 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem42Q9CR22 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem42Q9CR22 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem42Q9CR22 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem42Q9CR22 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem42Q9CR22 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem42Q9CR22 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem42Q9CR22 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Tmem42Q9CR22 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Tmem42Q9CR22 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem42Q9CR22 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem42Q9CR22 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem42Q9CR22 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmem42Q9CR22 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tmem42Q9CR22 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmem42Q9CR22 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tmem42Q9CR22 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmem42Q9CR22 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmem42Q9CR22 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmem42Q9CR22 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmem42Q9CR22 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmem42Q9CR22 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem42Q9CR22 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem42Q9CR22 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem42Q9CR22 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tmem42Q9CR22 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem42Q9CR22 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem42Q9CR22 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem42Q9CR22 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem42Q9CR22 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Tmem42Q9CR22 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem42Q9CR22 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem42Q9CR22 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem42Q9CR22 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem42Q9CR22 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem42Q9CR22 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem42Q9CR22 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem42Q9CR22 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Tmem42Q9CR22 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem42Q9CR22 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem42Q9CR22 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem42Q9CR22 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem42Q9CR22 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem42Q9CR22 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem42Q9CR22 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem42Q9CR22 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem42Q9CR22 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tmem42Q9CR22 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem42Q9CR22 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.54■□□□□ 0.56
Tmem42Q9CR22 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem42Q9CR22 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.54■□□□□ 0.56
Tmem42Q9CR22 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem42Q9CR22 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem42Q9CR22 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem42Q9CR22 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem42Q9CR22 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.53■□□□□ 0.56
Tmem42Q9CR22 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem42Q9CR22 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem42Q9CR22 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms