Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retreg3Q9CQV4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retreg3Q9CQV4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retreg3Q9CQV4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.65■■□□□ 1.06
Retreg3Q9CQV4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Retreg3Q9CQV4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.64■■□□□ 1.05
Retreg3Q9CQV4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retreg3Q9CQV4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retreg3Q9CQV4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retreg3Q9CQV4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retreg3Q9CQV4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.62■■□□□ 1.05
Retreg3Q9CQV4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retreg3Q9CQV4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retreg3Q9CQV4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retreg3Q9CQV4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retreg3Q9CQV4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retreg3Q9CQV4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retreg3Q9CQV4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Retreg3Q9CQV4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Retreg3Q9CQV4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retreg3Q9CQV4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.61■■□□□ 1.05
Retreg3Q9CQV4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retreg3Q9CQV4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retreg3Q9CQV4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Retreg3Q9CQV4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retreg3Q9CQV4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retreg3Q9CQV4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.61■■□□□ 1.05
Retreg3Q9CQV4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retreg3Q9CQV4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retreg3Q9CQV4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.6■■□□□ 1.05
Retreg3Q9CQV4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retreg3Q9CQV4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retreg3Q9CQV4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.59■■□□□ 1.05
Retreg3Q9CQV4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.59■■□□□ 1.05
Retreg3Q9CQV4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retreg3Q9CQV4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retreg3Q9CQV4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retreg3Q9CQV4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retreg3Q9CQV4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retreg3Q9CQV4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.58■■□□□ 1.05
Retreg3Q9CQV4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retreg3Q9CQV4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retreg3Q9CQV4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Retreg3Q9CQV4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Retreg3Q9CQV4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retreg3Q9CQV4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retreg3Q9CQV4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retreg3Q9CQV4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retreg3Q9CQV4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retreg3Q9CQV4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retreg3Q9CQV4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retreg3Q9CQV4 Gm13238-201ENSMUST00000117655 780 ntBASIC21.56■■□□□ 1.04
Retreg3Q9CQV4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.56■■□□□ 1.04
Retreg3Q9CQV4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retreg3Q9CQV4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retreg3Q9CQV4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retreg3Q9CQV4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Retreg3Q9CQV4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retreg3Q9CQV4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Retreg3Q9CQV4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retreg3Q9CQV4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retreg3Q9CQV4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retreg3Q9CQV4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.54■■□□□ 1.04
Retreg3Q9CQV4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retreg3Q9CQV4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.54■■□□□ 1.04
Retreg3Q9CQV4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.54■■□□□ 1.04
Retreg3Q9CQV4 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.54■■□□□ 1.04
Retreg3Q9CQV4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.54■■□□□ 1.04
Retreg3Q9CQV4 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.54■■□□□ 1.04
Retreg3Q9CQV4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retreg3Q9CQV4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retreg3Q9CQV4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retreg3Q9CQV4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retreg3Q9CQV4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retreg3Q9CQV4 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.53■■□□□ 1.04
Retreg3Q9CQV4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retreg3Q9CQV4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retreg3Q9CQV4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retreg3Q9CQV4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retreg3Q9CQV4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retreg3Q9CQV4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retreg3Q9CQV4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.52■■□□□ 1.04
Retreg3Q9CQV4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.52■■□□□ 1.04
Retreg3Q9CQV4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.52■■□□□ 1.04
Retreg3Q9CQV4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Retreg3Q9CQV4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Retreg3Q9CQV4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Retreg3Q9CQV4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retreg3Q9CQV4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retreg3Q9CQV4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retreg3Q9CQV4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retreg3Q9CQV4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.51■■□□□ 1.03
Retreg3Q9CQV4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retreg3Q9CQV4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retreg3Q9CQV4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.51■■□□□ 1.03
Retreg3Q9CQV4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retreg3Q9CQV4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Retreg3Q9CQV4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retreg3Q9CQV4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retreg3Q9CQV4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms