Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdk9Q99J95 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdk9Q99J95 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Cdk9Q99J95 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdk9Q99J95 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdk9Q99J95 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdk9Q99J95 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdk9Q99J95 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.46■■□□□ 1.03
Cdk9Q99J95 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cdk9Q99J95 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Cdk9Q99J95 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.46■■□□□ 1.03
Cdk9Q99J95 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.46■■□□□ 1.03
Cdk9Q99J95 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cdk9Q99J95 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Cdk9Q99J95 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdk9Q99J95 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Cdk9Q99J95 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdk9Q99J95 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cdk9Q99J95 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Cdk9Q99J95 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.45■■□□□ 1.02
Cdk9Q99J95 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdk9Q99J95 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Cdk9Q99J95 Gm11599-201ENSMUST00000118720 878 ntBASIC21.45■■□□□ 1.02
Cdk9Q99J95 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.45■■□□□ 1.02
Cdk9Q99J95 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdk9Q99J95 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Cdk9Q99J95 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.45■■□□□ 1.02
Cdk9Q99J95 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdk9Q99J95 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.45■■□□□ 1.02
Cdk9Q99J95 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdk9Q99J95 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdk9Q99J95 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.44■■□□□ 1.02
Cdk9Q99J95 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.44■■□□□ 1.02
Cdk9Q99J95 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdk9Q99J95 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdk9Q99J95 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdk9Q99J95 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdk9Q99J95 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdk9Q99J95 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.43■■□□□ 1.02
Cdk9Q99J95 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cdk9Q99J95 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdk9Q99J95 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdk9Q99J95 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.43■■□□□ 1.02
Cdk9Q99J95 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdk9Q99J95 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdk9Q99J95 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cdk9Q99J95 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.42■■□□□ 1.02
Cdk9Q99J95 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdk9Q99J95 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Cdk9Q99J95 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdk9Q99J95 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdk9Q99J95 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cdk9Q99J95 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdk9Q99J95 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdk9Q99J95 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdk9Q99J95 Gm4799-201ENSMUST00000095396 657 ntBASIC21.41■■□□□ 1.02
Cdk9Q99J95 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdk9Q99J95 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdk9Q99J95 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.41■■□□□ 1.02
Cdk9Q99J95 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdk9Q99J95 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdk9Q99J95 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdk9Q99J95 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
Cdk9Q99J95 Gm22567-201ENSMUST00000175542 342 ntBASIC21.4■■□□□ 1.02
Cdk9Q99J95 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cdk9Q99J95 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Cdk9Q99J95 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdk9Q99J95 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdk9Q99J95 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Cdk9Q99J95 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdk9Q99J95 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cdk9Q99J95 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cdk9Q99J95 Iqck-206ENSMUST00000208658 2891 ntBASIC21.38■■□□□ 1.01
Cdk9Q99J95 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdk9Q99J95 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cdk9Q99J95 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdk9Q99J95 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cdk9Q99J95 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cdk9Q99J95 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cdk9Q99J95 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdk9Q99J95 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cdk9Q99J95 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.38■■□□□ 1.01
Cdk9Q99J95 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.38■■□□□ 1.01
Cdk9Q99J95 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdk9Q99J95 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdk9Q99J95 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
Cdk9Q99J95 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdk9Q99J95 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdk9Q99J95 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdk9Q99J95 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Cdk9Q99J95 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Cdk9Q99J95 Gm9812-201ENSMUST00000061934 968 ntBASIC21.36■■□□□ 1.01
Cdk9Q99J95 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdk9Q99J95 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.36■■□□□ 1.01
Cdk9Q99J95 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdk9Q99J95 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cdk9Q99J95 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.35■■□□□ 1.01
Cdk9Q99J95 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.35■■□□□ 1.01
Cdk9Q99J95 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdk9Q99J95 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 131.1 ms