Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhgb1Q91XX8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Pcdhgb1Q91XX8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb1Q91XX8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb1Q91XX8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb1Q91XX8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb1Q91XX8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb1Q91XX8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.31■■□□□ 1.16
Pcdhgb1Q91XX8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.31■■□□□ 1.16
Pcdhgb1Q91XX8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb1Q91XX8 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.31■■□□□ 1.16
Pcdhgb1Q91XX8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb1Q91XX8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb1Q91XX8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb1Q91XX8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb1Q91XX8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Pcdhgb1Q91XX8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb1Q91XX8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.3■■□□□ 1.16
Pcdhgb1Q91XX8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Pcdhgb1Q91XX8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb1Q91XX8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb1Q91XX8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb1Q91XX8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb1Q91XX8 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.29■■□□□ 1.16
Pcdhgb1Q91XX8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb1Q91XX8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb1Q91XX8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb1Q91XX8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb1Q91XX8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Pcdhgb1Q91XX8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhgb1Q91XX8 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.28■■□□□ 1.16
Pcdhgb1Q91XX8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhgb1Q91XX8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhgb1Q91XX8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhgb1Q91XX8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Pcdhgb1Q91XX8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhgb1Q91XX8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhgb1Q91XX8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Pcdhgb1Q91XX8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhgb1Q91XX8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgb1Q91XX8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.26■■□□□ 1.15
Pcdhgb1Q91XX8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgb1Q91XX8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgb1Q91XX8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgb1Q91XX8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Pcdhgb1Q91XX8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Pcdhgb1Q91XX8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb1Q91XX8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Pcdhgb1Q91XX8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb1Q91XX8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb1Q91XX8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb1Q91XX8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb1Q91XX8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb1Q91XX8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb1Q91XX8 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.24■■□□□ 1.15
Pcdhgb1Q91XX8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb1Q91XX8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb1Q91XX8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb1Q91XX8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb1Q91XX8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb1Q91XX8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
Pcdhgb1Q91XX8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb1Q91XX8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgb1Q91XX8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.22■■□□□ 1.15
Pcdhgb1Q91XX8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.22■■□□□ 1.15
Pcdhgb1Q91XX8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Pcdhgb1Q91XX8 Etf1-202ENSMUST00000180351 108 ntBASIC22.22■■□□□ 1.15
Pcdhgb1Q91XX8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.22■■□□□ 1.15
Pcdhgb1Q91XX8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.22■■□□□ 1.15
Pcdhgb1Q91XX8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgb1Q91XX8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgb1Q91XX8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.21■■□□□ 1.15
Pcdhgb1Q91XX8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.21■■□□□ 1.15
Pcdhgb1Q91XX8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.21■■□□□ 1.15
Pcdhgb1Q91XX8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.21■■□□□ 1.15
Pcdhgb1Q91XX8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Pcdhgb1Q91XX8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.2■■□□□ 1.14
Pcdhgb1Q91XX8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Pcdhgb1Q91XX8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
Pcdhgb1Q91XX8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.2■■□□□ 1.14
Pcdhgb1Q91XX8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.2■■□□□ 1.14
Pcdhgb1Q91XX8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgb1Q91XX8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgb1Q91XX8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.2■■□□□ 1.14
Pcdhgb1Q91XX8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgb1Q91XX8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgb1Q91XX8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb1Q91XX8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb1Q91XX8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb1Q91XX8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb1Q91XX8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb1Q91XX8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb1Q91XX8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb1Q91XX8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb1Q91XX8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb1Q91XX8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb1Q91XX8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb1Q91XX8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.17■■□□□ 1.14
Pcdhgb1Q91XX8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb1Q91XX8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms