Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rpa1Q8VEE4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rpa1Q8VEE4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpa1Q8VEE4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpa1Q8VEE4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.51■■□□□ 1.03
Rpa1Q8VEE4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.51■■□□□ 1.03
Rpa1Q8VEE4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rpa1Q8VEE4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rpa1Q8VEE4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpa1Q8VEE4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rpa1Q8VEE4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpa1Q8VEE4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpa1Q8VEE4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.5■■□□□ 1.03
Rpa1Q8VEE4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.5■■□□□ 1.03
Rpa1Q8VEE4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpa1Q8VEE4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Rpa1Q8VEE4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rpa1Q8VEE4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpa1Q8VEE4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpa1Q8VEE4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpa1Q8VEE4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpa1Q8VEE4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rpa1Q8VEE4 Gm4799-201ENSMUST00000095396 657 ntBASIC21.49■■□□□ 1.03
Rpa1Q8VEE4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpa1Q8VEE4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rpa1Q8VEE4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rpa1Q8VEE4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rpa1Q8VEE4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rpa1Q8VEE4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rpa1Q8VEE4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rpa1Q8VEE4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rpa1Q8VEE4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rpa1Q8VEE4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rpa1Q8VEE4 Gm9812-201ENSMUST00000061934 968 ntBASIC21.47■■□□□ 1.03
Rpa1Q8VEE4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Rpa1Q8VEE4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rpa1Q8VEE4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpa1Q8VEE4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rpa1Q8VEE4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rpa1Q8VEE4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Rpa1Q8VEE4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rpa1Q8VEE4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Rpa1Q8VEE4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpa1Q8VEE4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rpa1Q8VEE4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.45■■□□□ 1.02
Rpa1Q8VEE4 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.45■■□□□ 1.02
Rpa1Q8VEE4 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.45■■□□□ 1.02
Rpa1Q8VEE4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rpa1Q8VEE4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Rpa1Q8VEE4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpa1Q8VEE4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.44■■□□□ 1.02
Rpa1Q8VEE4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpa1Q8VEE4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rpa1Q8VEE4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.44■■□□□ 1.02
Rpa1Q8VEE4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpa1Q8VEE4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpa1Q8VEE4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Rpa1Q8VEE4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpa1Q8VEE4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpa1Q8VEE4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Rpa1Q8VEE4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpa1Q8VEE4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rpa1Q8VEE4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpa1Q8VEE4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpa1Q8VEE4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rpa1Q8VEE4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpa1Q8VEE4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.43■■□□□ 1.02
Rpa1Q8VEE4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpa1Q8VEE4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rpa1Q8VEE4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpa1Q8VEE4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpa1Q8VEE4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.42■■□□□ 1.02
Rpa1Q8VEE4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rpa1Q8VEE4 Iqck-206ENSMUST00000208658 2891 ntBASIC21.42■■□□□ 1.02
Rpa1Q8VEE4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpa1Q8VEE4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Rpa1Q8VEE4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rpa1Q8VEE4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.41■■□□□ 1.02
Rpa1Q8VEE4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.41■■□□□ 1.02
Rpa1Q8VEE4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpa1Q8VEE4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpa1Q8VEE4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Rpa1Q8VEE4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rpa1Q8VEE4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rpa1Q8VEE4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rpa1Q8VEE4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
Rpa1Q8VEE4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rpa1Q8VEE4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rpa1Q8VEE4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rpa1Q8VEE4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rpa1Q8VEE4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rpa1Q8VEE4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.4■■□□□ 1.02
Rpa1Q8VEE4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.4■■□□□ 1.02
Rpa1Q8VEE4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.4■■□□□ 1.02
Rpa1Q8VEE4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Rpa1Q8VEE4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rpa1Q8VEE4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.39■■□□□ 1.01
Rpa1Q8VEE4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.39■■□□□ 1.01
Rpa1Q8VEE4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rpa1Q8VEE4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms