Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a20aQ8VDB9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a20aQ8VDB9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Slc6a20aQ8VDB9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc6a20aQ8VDB9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Slc6a20aQ8VDB9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a20aQ8VDB9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a20aQ8VDB9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a20aQ8VDB9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a20aQ8VDB9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.2■□□□□ 0.98
Slc6a20aQ8VDB9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a20aQ8VDB9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.2■□□□□ 0.98
Slc6a20aQ8VDB9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a20aQ8VDB9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Slc6a20aQ8VDB9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc6a20aQ8VDB9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a20aQ8VDB9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a20aQ8VDB9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a20aQ8VDB9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a20aQ8VDB9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a20aQ8VDB9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
Slc6a20aQ8VDB9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc6a20aQ8VDB9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a20aQ8VDB9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.18■□□□□ 0.98
Slc6a20aQ8VDB9 Gm12366-201ENSMUST00000121722 873 ntBASIC21.18■□□□□ 0.98
Slc6a20aQ8VDB9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.18■□□□□ 0.98
Slc6a20aQ8VDB9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a20aQ8VDB9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a20aQ8VDB9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a20aQ8VDB9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.18■□□□□ 0.98
Slc6a20aQ8VDB9 Gm5786-201ENSMUST00000085368 882 ntBASIC21.18■□□□□ 0.98
Slc6a20aQ8VDB9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a20aQ8VDB9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a20aQ8VDB9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc6a20aQ8VDB9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a20aQ8VDB9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a20aQ8VDB9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a20aQ8VDB9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a20aQ8VDB9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc6a20aQ8VDB9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a20aQ8VDB9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Slc6a20aQ8VDB9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a20aQ8VDB9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Slc6a20aQ8VDB9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slc6a20aQ8VDB9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a20aQ8VDB9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a20aQ8VDB9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a20aQ8VDB9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a20aQ8VDB9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc6a20aQ8VDB9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.15■□□□□ 0.98
Slc6a20aQ8VDB9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Slc6a20aQ8VDB9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slc6a20aQ8VDB9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.14■□□□□ 0.98
Slc6a20aQ8VDB9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slc6a20aQ8VDB9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slc6a20aQ8VDB9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Slc6a20aQ8VDB9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.14■□□□□ 0.97
Slc6a20aQ8VDB9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a20aQ8VDB9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a20aQ8VDB9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc6a20aQ8VDB9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a20aQ8VDB9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc6a20aQ8VDB9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.13■□□□□ 0.97
Slc6a20aQ8VDB9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.12■□□□□ 0.97
Slc6a20aQ8VDB9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a20aQ8VDB9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a20aQ8VDB9 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.12■□□□□ 0.97
Slc6a20aQ8VDB9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a20aQ8VDB9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc6a20aQ8VDB9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a20aQ8VDB9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a20aQ8VDB9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a20aQ8VDB9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.11■□□□□ 0.97
Slc6a20aQ8VDB9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a20aQ8VDB9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.11■□□□□ 0.97
Slc6a20aQ8VDB9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a20aQ8VDB9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a20aQ8VDB9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a20aQ8VDB9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.1■□□□□ 0.97
Slc6a20aQ8VDB9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a20aQ8VDB9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a20aQ8VDB9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a20aQ8VDB9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a20aQ8VDB9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a20aQ8VDB9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.09■□□□□ 0.97
Slc6a20aQ8VDB9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a20aQ8VDB9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Slc6a20aQ8VDB9 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.08■□□□□ 0.97
Slc6a20aQ8VDB9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Slc6a20aQ8VDB9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a20aQ8VDB9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.08■□□□□ 0.97
Slc6a20aQ8VDB9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.08■□□□□ 0.97
Slc6a20aQ8VDB9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a20aQ8VDB9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.08■□□□□ 0.97
Slc6a20aQ8VDB9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a20aQ8VDB9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc6a20aQ8VDB9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc6a20aQ8VDB9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc6a20aQ8VDB9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc6a20aQ8VDB9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms