Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Sh3kbp1Q8R550 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sh3kbp1Q8R550 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Sh3kbp1Q8R550 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Sh3kbp1Q8R550 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Sh3kbp1Q8R550 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Sh3kbp1Q8R550 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3kbp1Q8R550 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3kbp1Q8R550 Gm14117-201ENSMUST00000122417 843 ntBASIC22.06■■□□□ 1.12
Sh3kbp1Q8R550 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3kbp1Q8R550 Gm45102-201ENSMUST00000207427 857 ntBASIC22.06■■□□□ 1.12
Sh3kbp1Q8R550 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3kbp1Q8R550 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3kbp1Q8R550 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3kbp1Q8R550 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sh3kbp1Q8R550 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sh3kbp1Q8R550 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.05■■□□□ 1.12
Sh3kbp1Q8R550 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sh3kbp1Q8R550 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Sh3kbp1Q8R550 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sh3kbp1Q8R550 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Sh3kbp1Q8R550 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.04■■□□□ 1.12
Sh3kbp1Q8R550 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Sh3kbp1Q8R550 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Sh3kbp1Q8R550 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Sh3kbp1Q8R550 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Sh3kbp1Q8R550 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sh3kbp1Q8R550 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Sh3kbp1Q8R550 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sh3kbp1Q8R550 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.03■■□□□ 1.12
Sh3kbp1Q8R550 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.03■■□□□ 1.12
Sh3kbp1Q8R550 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sh3kbp1Q8R550 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.02■■□□□ 1.12
Sh3kbp1Q8R550 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sh3kbp1Q8R550 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sh3kbp1Q8R550 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.02■■□□□ 1.12
Sh3kbp1Q8R550 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.02■■□□□ 1.12
Sh3kbp1Q8R550 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.02■■□□□ 1.12
Sh3kbp1Q8R550 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sh3kbp1Q8R550 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.02■■□□□ 1.12
Sh3kbp1Q8R550 Gm9959-201ENSMUST00000068277 390 ntBASIC22.02■■□□□ 1.12
Sh3kbp1Q8R550 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sh3kbp1Q8R550 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Sh3kbp1Q8R550 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sh3kbp1Q8R550 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sh3kbp1Q8R550 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3kbp1Q8R550 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Sh3kbp1Q8R550 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3kbp1Q8R550 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.01■■□□□ 1.11
Sh3kbp1Q8R550 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sh3kbp1Q8R550 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sh3kbp1Q8R550 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Sh3kbp1Q8R550 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sh3kbp1Q8R550 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22■■□□□ 1.11
Sh3kbp1Q8R550 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22■■□□□ 1.11
Sh3kbp1Q8R550 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Sh3kbp1Q8R550 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22■■□□□ 1.11
Sh3kbp1Q8R550 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Sh3kbp1Q8R550 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sh3kbp1Q8R550 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3kbp1Q8R550 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3kbp1Q8R550 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3kbp1Q8R550 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3kbp1Q8R550 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
Sh3kbp1Q8R550 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3kbp1Q8R550 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3kbp1Q8R550 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3kbp1Q8R550 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sh3kbp1Q8R550 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.98■■□□□ 1.11
Sh3kbp1Q8R550 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3kbp1Q8R550 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3kbp1Q8R550 Gm15039-201ENSMUST00000118914 875 ntBASIC21.97■■□□□ 1.11
Sh3kbp1Q8R550 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3kbp1Q8R550 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Sh3kbp1Q8R550 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sh3kbp1Q8R550 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Sh3kbp1Q8R550 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3kbp1Q8R550 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3kbp1Q8R550 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3kbp1Q8R550 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
Sh3kbp1Q8R550 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.96■■□□□ 1.11
Sh3kbp1Q8R550 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.96■■□□□ 1.11
Sh3kbp1Q8R550 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3kbp1Q8R550 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sh3kbp1Q8R550 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Sh3kbp1Q8R550 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Sh3kbp1Q8R550 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Sh3kbp1Q8R550 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.95■■□□□ 1.1
Sh3kbp1Q8R550 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3kbp1Q8R550 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Sh3kbp1Q8R550 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Sh3kbp1Q8R550 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sh3kbp1Q8R550 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3kbp1Q8R550 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Sh3kbp1Q8R550 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3kbp1Q8R550 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3kbp1Q8R550 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sh3kbp1Q8R550 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Sh3kbp1Q8R550 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Sh3kbp1Q8R550 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms