Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
Ddx54Q8K4L0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
Ddx54Q8K4L0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC28.78■■■□□ 2.2
Ddx54Q8K4L0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
Ddx54Q8K4L0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ddx54Q8K4L0 Nsd1-206ENSMUST00000224918 1001 ntBASIC28.78■■■□□ 2.2
Ddx54Q8K4L0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Ddx54Q8K4L0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC28.77■■■□□ 2.2
Ddx54Q8K4L0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC28.77■■■□□ 2.2
Ddx54Q8K4L0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ddx54Q8K4L0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ddx54Q8K4L0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Ddx54Q8K4L0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC28.77■■■□□ 2.2
Ddx54Q8K4L0 AC116713.1-201ENSMUST00000215074 430 ntBASIC28.77■■■□□ 2.2
Ddx54Q8K4L0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Ddx54Q8K4L0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC28.76■■■□□ 2.19
Ddx54Q8K4L0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
Ddx54Q8K4L0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC28.75■■■□□ 2.19
Ddx54Q8K4L0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Ddx54Q8K4L0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
Ddx54Q8K4L0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Ddx54Q8K4L0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Ddx54Q8K4L0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Ddx54Q8K4L0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Ddx54Q8K4L0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Ddx54Q8K4L0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Ddx54Q8K4L0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Ddx54Q8K4L0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
Ddx54Q8K4L0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Ddx54Q8K4L0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
Ddx54Q8K4L0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC28.71■■■□□ 2.19
Ddx54Q8K4L0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC28.71■■■□□ 2.19
Ddx54Q8K4L0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ddx54Q8K4L0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Ddx54Q8K4L0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ddx54Q8K4L0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Ddx54Q8K4L0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ddx54Q8K4L0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC28.69■■■□□ 2.18
Ddx54Q8K4L0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC28.69■■■□□ 2.18
Ddx54Q8K4L0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
Ddx54Q8K4L0 Gm21168-201ENSMUST00000199646 1096 ntBASIC28.69■■■□□ 2.18
Ddx54Q8K4L0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC28.69■■■□□ 2.18
Ddx54Q8K4L0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ddx54Q8K4L0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ddx54Q8K4L0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ddx54Q8K4L0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC28.68■■■□□ 2.18
Ddx54Q8K4L0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ddx54Q8K4L0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Ddx54Q8K4L0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Ddx54Q8K4L0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ddx54Q8K4L0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ddx54Q8K4L0 Gm10620-201ENSMUST00000098379 1332 ntBASIC28.68■■■□□ 2.18
Ddx54Q8K4L0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ddx54Q8K4L0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC28.67■■■□□ 2.18
Ddx54Q8K4L0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Ddx54Q8K4L0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ddx54Q8K4L0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ddx54Q8K4L0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Ddx54Q8K4L0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
Ddx54Q8K4L0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Ddx54Q8K4L0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC28.65■■■□□ 2.18
Ddx54Q8K4L0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Ddx54Q8K4L0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
Ddx54Q8K4L0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC28.64■■■□□ 2.18
Ddx54Q8K4L0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ddx54Q8K4L0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ddx54Q8K4L0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ddx54Q8K4L0 Gm43017-201ENSMUST00000198296 752 ntBASIC28.64■■■□□ 2.18
Ddx54Q8K4L0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ddx54Q8K4L0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ddx54Q8K4L0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ddx54Q8K4L0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Ddx54Q8K4L0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ddx54Q8K4L0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC28.62■■■□□ 2.17
Ddx54Q8K4L0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Ddx54Q8K4L0 Gm5874-201ENSMUST00000096101 508 ntBASIC28.62■■■□□ 2.17
Ddx54Q8K4L0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Ddx54Q8K4L0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ddx54Q8K4L0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ddx54Q8K4L0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ddx54Q8K4L0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC28.6■■■□□ 2.17
Ddx54Q8K4L0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ddx54Q8K4L0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ddx54Q8K4L0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ddx54Q8K4L0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC28.59■■■□□ 2.17
Ddx54Q8K4L0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ddx54Q8K4L0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ddx54Q8K4L0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ddx54Q8K4L0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ddx54Q8K4L0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Ddx54Q8K4L0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Ddx54Q8K4L0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
Ddx54Q8K4L0 Gm43137-201ENSMUST00000198052 594 ntBASIC28.58■■■□□ 2.17
Ddx54Q8K4L0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ddx54Q8K4L0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ddx54Q8K4L0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ddx54Q8K4L0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC28.57■■■□□ 2.16
Ddx54Q8K4L0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ddx54Q8K4L0 Mir7075-201ENSMUST00000184187 82 ntBASIC28.56■■■□□ 2.16
Ddx54Q8K4L0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 166.9 ms