Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.56■□□□□ 0.72
Ebf4Q8K4J2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Ebf4Q8K4J2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ebf4Q8K4J2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ebf4Q8K4J2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ebf4Q8K4J2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ebf4Q8K4J2 Gm45855-201ENSMUST00000212546 880 ntBASIC19.55■□□□□ 0.72
Ebf4Q8K4J2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ebf4Q8K4J2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ebf4Q8K4J2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ebf4Q8K4J2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ebf4Q8K4J2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ebf4Q8K4J2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.54■□□□□ 0.72
Ebf4Q8K4J2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ebf4Q8K4J2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ebf4Q8K4J2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ebf4Q8K4J2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ebf4Q8K4J2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ebf4Q8K4J2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ebf4Q8K4J2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ebf4Q8K4J2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ebf4Q8K4J2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ebf4Q8K4J2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.53■□□□□ 0.72
Ebf4Q8K4J2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ebf4Q8K4J2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ebf4Q8K4J2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Ebf4Q8K4J2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ebf4Q8K4J2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ebf4Q8K4J2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ebf4Q8K4J2 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.52■□□□□ 0.72
Ebf4Q8K4J2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ebf4Q8K4J2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.52■□□□□ 0.72
Ebf4Q8K4J2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ebf4Q8K4J2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.52■□□□□ 0.72
Ebf4Q8K4J2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ebf4Q8K4J2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ebf4Q8K4J2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Ebf4Q8K4J2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ebf4Q8K4J2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ebf4Q8K4J2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ebf4Q8K4J2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.51■□□□□ 0.71
Ebf4Q8K4J2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf4Q8K4J2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf4Q8K4J2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.51■□□□□ 0.71
Ebf4Q8K4J2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf4Q8K4J2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf4Q8K4J2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ebf4Q8K4J2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ebf4Q8K4J2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Ebf4Q8K4J2 Golph3-202ENSMUST00000226517 2359 ntBASIC19.5■□□□□ 0.71
Ebf4Q8K4J2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ebf4Q8K4J2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ebf4Q8K4J2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ebf4Q8K4J2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ebf4Q8K4J2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Ebf4Q8K4J2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf4Q8K4J2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf4Q8K4J2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf4Q8K4J2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf4Q8K4J2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ebf4Q8K4J2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf4Q8K4J2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf4Q8K4J2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf4Q8K4J2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf4Q8K4J2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ebf4Q8K4J2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf4Q8K4J2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf4Q8K4J2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf4Q8K4J2 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.47■□□□□ 0.71
Ebf4Q8K4J2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf4Q8K4J2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf4Q8K4J2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf4Q8K4J2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf4Q8K4J2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf4Q8K4J2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ebf4Q8K4J2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ebf4Q8K4J2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf4Q8K4J2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf4Q8K4J2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ebf4Q8K4J2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ebf4Q8K4J2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ebf4Q8K4J2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ebf4Q8K4J2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.45■□□□□ 0.7
Ebf4Q8K4J2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ebf4Q8K4J2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf4Q8K4J2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf4Q8K4J2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf4Q8K4J2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Ebf4Q8K4J2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf4Q8K4J2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.44■□□□□ 0.7
Ebf4Q8K4J2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf4Q8K4J2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf4Q8K4J2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ebf4Q8K4J2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf4Q8K4J2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf4Q8K4J2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf4Q8K4J2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf4Q8K4J2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf4Q8K4J2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ebf4Q8K4J2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms