Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cchcr1Q8K2I2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cchcr1Q8K2I2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Cchcr1Q8K2I2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cchcr1Q8K2I2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC25.37■■□□□ 1.65
Cchcr1Q8K2I2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Cchcr1Q8K2I2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cchcr1Q8K2I2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cchcr1Q8K2I2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.36■■□□□ 1.65
Cchcr1Q8K2I2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cchcr1Q8K2I2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cchcr1Q8K2I2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Cchcr1Q8K2I2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cchcr1Q8K2I2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Cchcr1Q8K2I2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cchcr1Q8K2I2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cchcr1Q8K2I2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Cchcr1Q8K2I2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cchcr1Q8K2I2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cchcr1Q8K2I2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cchcr1Q8K2I2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cchcr1Q8K2I2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cchcr1Q8K2I2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cchcr1Q8K2I2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Cchcr1Q8K2I2 Gm37415-201ENSMUST00000192265 2054 ntBASIC25.33■■□□□ 1.65
Cchcr1Q8K2I2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cchcr1Q8K2I2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.33■■□□□ 1.65
Cchcr1Q8K2I2 Gm32051-202ENSMUST00000197905 2385 ntBASIC25.33■■□□□ 1.65
Cchcr1Q8K2I2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cchcr1Q8K2I2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cchcr1Q8K2I2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cchcr1Q8K2I2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cchcr1Q8K2I2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC25.32■■□□□ 1.64
Cchcr1Q8K2I2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cchcr1Q8K2I2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cchcr1Q8K2I2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cchcr1Q8K2I2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.32■■□□□ 1.64
Cchcr1Q8K2I2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cchcr1Q8K2I2 Gm42418-201ENSMUST00000182010 1831 ntBASIC25.32■■□□□ 1.64
Cchcr1Q8K2I2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cchcr1Q8K2I2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cchcr1Q8K2I2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cchcr1Q8K2I2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.31■■□□□ 1.64
Cchcr1Q8K2I2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cchcr1Q8K2I2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Cchcr1Q8K2I2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cchcr1Q8K2I2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cchcr1Q8K2I2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.3■■□□□ 1.64
Cchcr1Q8K2I2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC25.3■■□□□ 1.64
Cchcr1Q8K2I2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC25.29■■□□□ 1.64
Cchcr1Q8K2I2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cchcr1Q8K2I2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC25.29■■□□□ 1.64
Cchcr1Q8K2I2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cchcr1Q8K2I2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cchcr1Q8K2I2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cchcr1Q8K2I2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cchcr1Q8K2I2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Cchcr1Q8K2I2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cchcr1Q8K2I2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Cchcr1Q8K2I2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Cchcr1Q8K2I2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC25.28■■□□□ 1.64
Cchcr1Q8K2I2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cchcr1Q8K2I2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Cchcr1Q8K2I2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Cchcr1Q8K2I2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cchcr1Q8K2I2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
Cchcr1Q8K2I2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cchcr1Q8K2I2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cchcr1Q8K2I2 Gm6277-202ENSMUST00000224036 2779 ntBASIC25.27■■□□□ 1.64
Cchcr1Q8K2I2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Cchcr1Q8K2I2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cchcr1Q8K2I2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cchcr1Q8K2I2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Cchcr1Q8K2I2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Cchcr1Q8K2I2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Cchcr1Q8K2I2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Cchcr1Q8K2I2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC25.25■■□□□ 1.63
Cchcr1Q8K2I2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Cchcr1Q8K2I2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25.25■■□□□ 1.63
Cchcr1Q8K2I2 Gm14523-201ENSMUST00000117260 558 ntBASIC25.25■■□□□ 1.63
Cchcr1Q8K2I2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.25■■□□□ 1.63
Cchcr1Q8K2I2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cchcr1Q8K2I2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cchcr1Q8K2I2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cchcr1Q8K2I2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cchcr1Q8K2I2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC25.24■■□□□ 1.63
Cchcr1Q8K2I2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cchcr1Q8K2I2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC25.23■■□□□ 1.63
Cchcr1Q8K2I2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Cchcr1Q8K2I2 Gm11175-201ENSMUST00000116172 543 ntBASIC25.23■■□□□ 1.63
Cchcr1Q8K2I2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC25.23■■□□□ 1.63
Cchcr1Q8K2I2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Cchcr1Q8K2I2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cchcr1Q8K2I2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cchcr1Q8K2I2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC25.22■■□□□ 1.63
Cchcr1Q8K2I2 Gm27502-201ENSMUST00000183495 199 ntBASIC25.22■■□□□ 1.63
Cchcr1Q8K2I2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.22■■□□□ 1.63
Cchcr1Q8K2I2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cchcr1Q8K2I2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cchcr1Q8K2I2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms