Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim68Q8K243 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Trim68Q8K243 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Trim68Q8K243 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.12■■□□□ 1.29
Trim68Q8K243 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.12■■□□□ 1.29
Trim68Q8K243 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Trim68Q8K243 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim68Q8K243 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim68Q8K243 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.12■■□□□ 1.29
Trim68Q8K243 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim68Q8K243 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim68Q8K243 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim68Q8K243 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim68Q8K243 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim68Q8K243 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.11■■□□□ 1.29
Trim68Q8K243 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim68Q8K243 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim68Q8K243 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trim68Q8K243 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim68Q8K243 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim68Q8K243 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.1■■□□□ 1.29
Trim68Q8K243 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.1■■□□□ 1.29
Trim68Q8K243 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim68Q8K243 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Trim68Q8K243 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Trim68Q8K243 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim68Q8K243 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.09■■□□□ 1.29
Trim68Q8K243 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim68Q8K243 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim68Q8K243 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim68Q8K243 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim68Q8K243 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim68Q8K243 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Trim68Q8K243 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.08■■□□□ 1.29
Trim68Q8K243 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim68Q8K243 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.08■■□□□ 1.29
Trim68Q8K243 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim68Q8K243 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Trim68Q8K243 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Trim68Q8K243 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim68Q8K243 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim68Q8K243 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim68Q8K243 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim68Q8K243 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim68Q8K243 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
Trim68Q8K243 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim68Q8K243 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim68Q8K243 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim68Q8K243 Gm22238-201ENSMUST00000175222 88 ntBASIC23.06■■□□□ 1.28
Trim68Q8K243 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.06■■□□□ 1.28
Trim68Q8K243 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim68Q8K243 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Trim68Q8K243 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim68Q8K243 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim68Q8K243 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim68Q8K243 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.05■■□□□ 1.28
Trim68Q8K243 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.05■■□□□ 1.28
Trim68Q8K243 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim68Q8K243 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Trim68Q8K243 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
Trim68Q8K243 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim68Q8K243 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Trim68Q8K243 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim68Q8K243 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim68Q8K243 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.04■■□□□ 1.28
Trim68Q8K243 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.04■■□□□ 1.28
Trim68Q8K243 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Trim68Q8K243 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Trim68Q8K243 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim68Q8K243 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
Trim68Q8K243 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.03■■□□□ 1.28
Trim68Q8K243 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Trim68Q8K243 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim68Q8K243 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim68Q8K243 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim68Q8K243 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.02■■□□□ 1.28
Trim68Q8K243 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim68Q8K243 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim68Q8K243 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Trim68Q8K243 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim68Q8K243 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Trim68Q8K243 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
Trim68Q8K243 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim68Q8K243 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trim68Q8K243 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim68Q8K243 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim68Q8K243 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim68Q8K243 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim68Q8K243 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim68Q8K243 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Trim68Q8K243 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim68Q8K243 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trim68Q8K243 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.99■■□□□ 1.27
Trim68Q8K243 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trim68Q8K243 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim68Q8K243 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim68Q8K243 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim68Q8K243 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim68Q8K243 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trim68Q8K243 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms