Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
PdgfcQ8CI19 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PdgfcQ8CI19 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
PdgfcQ8CI19 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PdgfcQ8CI19 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.99■■□□□ 1.43
PdgfcQ8CI19 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.99■■□□□ 1.43
PdgfcQ8CI19 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
PdgfcQ8CI19 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PdgfcQ8CI19 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.98■■□□□ 1.43
PdgfcQ8CI19 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.98■■□□□ 1.43
PdgfcQ8CI19 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
PdgfcQ8CI19 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PdgfcQ8CI19 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
PdgfcQ8CI19 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PdgfcQ8CI19 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PdgfcQ8CI19 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PdgfcQ8CI19 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PdgfcQ8CI19 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PdgfcQ8CI19 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfcQ8CI19 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfcQ8CI19 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfcQ8CI19 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
PdgfcQ8CI19 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfcQ8CI19 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfcQ8CI19 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfcQ8CI19 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.96■■□□□ 1.43
PdgfcQ8CI19 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfcQ8CI19 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PdgfcQ8CI19 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PdgfcQ8CI19 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PdgfcQ8CI19 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.94■■□□□ 1.42
PdgfcQ8CI19 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PdgfcQ8CI19 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.94■■□□□ 1.42
PdgfcQ8CI19 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PdgfcQ8CI19 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PdgfcQ8CI19 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
PdgfcQ8CI19 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.93■■□□□ 1.42
PdgfcQ8CI19 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PdgfcQ8CI19 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PdgfcQ8CI19 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.93■■□□□ 1.42
PdgfcQ8CI19 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.93■■□□□ 1.42
PdgfcQ8CI19 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
PdgfcQ8CI19 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.92■■□□□ 1.42
PdgfcQ8CI19 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.92■■□□□ 1.42
PdgfcQ8CI19 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PdgfcQ8CI19 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
PdgfcQ8CI19 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PdgfcQ8CI19 Gm12922-201ENSMUST00000120626 809 ntBASIC23.91■■□□□ 1.42
PdgfcQ8CI19 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PdgfcQ8CI19 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PdgfcQ8CI19 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PdgfcQ8CI19 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
PdgfcQ8CI19 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.9■■□□□ 1.42
PdgfcQ8CI19 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PdgfcQ8CI19 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PdgfcQ8CI19 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.89■■□□□ 1.41
PdgfcQ8CI19 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PdgfcQ8CI19 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PdgfcQ8CI19 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PdgfcQ8CI19 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
PdgfcQ8CI19 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PdgfcQ8CI19 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PdgfcQ8CI19 Gm10620-201ENSMUST00000098379 1332 ntBASIC23.87■■□□□ 1.41
PdgfcQ8CI19 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PdgfcQ8CI19 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PdgfcQ8CI19 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PdgfcQ8CI19 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PdgfcQ8CI19 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.86■■□□□ 1.41
PdgfcQ8CI19 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.86■■□□□ 1.41
PdgfcQ8CI19 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC23.86■■□□□ 1.41
PdgfcQ8CI19 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PdgfcQ8CI19 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PdgfcQ8CI19 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.85■■□□□ 1.41
PdgfcQ8CI19 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PdgfcQ8CI19 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
PdgfcQ8CI19 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.85■■□□□ 1.41
PdgfcQ8CI19 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.84■■□□□ 1.41
PdgfcQ8CI19 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.84■■□□□ 1.41
PdgfcQ8CI19 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PdgfcQ8CI19 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PdgfcQ8CI19 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PdgfcQ8CI19 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PdgfcQ8CI19 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PdgfcQ8CI19 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PdgfcQ8CI19 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PdgfcQ8CI19 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PdgfcQ8CI19 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PdgfcQ8CI19 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PdgfcQ8CI19 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PdgfcQ8CI19 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PdgfcQ8CI19 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PdgfcQ8CI19 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PdgfcQ8CI19 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PdgfcQ8CI19 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.81■■□□□ 1.4
PdgfcQ8CI19 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PdgfcQ8CI19 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PdgfcQ8CI19 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PdgfcQ8CI19 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC23.81■■□□□ 1.4
PdgfcQ8CI19 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PdgfcQ8CI19 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 148.2 ms