Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sox30Q8CGW4 Gm43403-201ENSMUST00000198011 1786 ntBASIC23.69■■□□□ 1.38
Sox30Q8CGW4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sox30Q8CGW4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sox30Q8CGW4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Sox30Q8CGW4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sox30Q8CGW4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sox30Q8CGW4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sox30Q8CGW4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Sox30Q8CGW4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.67■■□□□ 1.38
Sox30Q8CGW4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sox30Q8CGW4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sox30Q8CGW4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Sox30Q8CGW4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.66■■□□□ 1.38
Sox30Q8CGW4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Sox30Q8CGW4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.66■■□□□ 1.38
Sox30Q8CGW4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Sox30Q8CGW4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sox30Q8CGW4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sox30Q8CGW4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sox30Q8CGW4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Sox30Q8CGW4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sox30Q8CGW4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sox30Q8CGW4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sox30Q8CGW4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sox30Q8CGW4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.64■■□□□ 1.37
Sox30Q8CGW4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Sox30Q8CGW4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Sox30Q8CGW4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Sox30Q8CGW4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sox30Q8CGW4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sox30Q8CGW4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sox30Q8CGW4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.62■■□□□ 1.37
Sox30Q8CGW4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sox30Q8CGW4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sox30Q8CGW4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sox30Q8CGW4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sox30Q8CGW4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sox30Q8CGW4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sox30Q8CGW4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sox30Q8CGW4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sox30Q8CGW4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sox30Q8CGW4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sox30Q8CGW4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Sox30Q8CGW4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Sox30Q8CGW4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Sox30Q8CGW4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sox30Q8CGW4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Sox30Q8CGW4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Sox30Q8CGW4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.6■■□□□ 1.37
Sox30Q8CGW4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Sox30Q8CGW4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sox30Q8CGW4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sox30Q8CGW4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.58■■□□□ 1.37
Sox30Q8CGW4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sox30Q8CGW4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.58■■□□□ 1.37
Sox30Q8CGW4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sox30Q8CGW4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Sox30Q8CGW4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.58■■□□□ 1.36
Sox30Q8CGW4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sox30Q8CGW4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sox30Q8CGW4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sox30Q8CGW4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Sox30Q8CGW4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sox30Q8CGW4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.57■■□□□ 1.36
Sox30Q8CGW4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sox30Q8CGW4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Sox30Q8CGW4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sox30Q8CGW4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC23.56■■□□□ 1.36
Sox30Q8CGW4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.56■■□□□ 1.36
Sox30Q8CGW4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Sox30Q8CGW4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sox30Q8CGW4 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.56■■□□□ 1.36
Sox30Q8CGW4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sox30Q8CGW4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sox30Q8CGW4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Sox30Q8CGW4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Sox30Q8CGW4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sox30Q8CGW4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sox30Q8CGW4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC23.55■■□□□ 1.36
Sox30Q8CGW4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sox30Q8CGW4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sox30Q8CGW4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sox30Q8CGW4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sox30Q8CGW4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
Sox30Q8CGW4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sox30Q8CGW4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Sox30Q8CGW4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sox30Q8CGW4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.54■■□□□ 1.36
Sox30Q8CGW4 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.54■■□□□ 1.36
Sox30Q8CGW4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sox30Q8CGW4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sox30Q8CGW4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sox30Q8CGW4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sox30Q8CGW4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Sox30Q8CGW4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sox30Q8CGW4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sox30Q8CGW4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Sox30Q8CGW4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Sox30Q8CGW4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms