Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Mmp28Q8CGV8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Mmp28Q8CGV8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp28Q8CGV8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp28Q8CGV8 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.24■□□□□ 0.51
Mmp28Q8CGV8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp28Q8CGV8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp28Q8CGV8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp28Q8CGV8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Mmp28Q8CGV8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Mmp28Q8CGV8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp28Q8CGV8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Mmp28Q8CGV8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Mmp28Q8CGV8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Mmp28Q8CGV8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp28Q8CGV8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp28Q8CGV8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp28Q8CGV8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.21■□□□□ 0.51
Mmp28Q8CGV8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp28Q8CGV8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp28Q8CGV8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp28Q8CGV8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp28Q8CGV8 Particl-201ENSMUST00000205370 1560 ntBASIC18.21■□□□□ 0.51
Mmp28Q8CGV8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp28Q8CGV8 Golph3-202ENSMUST00000226517 2359 ntBASIC18.2■□□□□ 0.5
Mmp28Q8CGV8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Mmp28Q8CGV8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp28Q8CGV8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp28Q8CGV8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp28Q8CGV8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Mmp28Q8CGV8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.2■□□□□ 0.5
Mmp28Q8CGV8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp28Q8CGV8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp28Q8CGV8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.19■□□□□ 0.5
Mmp28Q8CGV8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp28Q8CGV8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp28Q8CGV8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp28Q8CGV8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Mmp28Q8CGV8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.19■□□□□ 0.5
Mmp28Q8CGV8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.18■□□□□ 0.5
Mmp28Q8CGV8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Mmp28Q8CGV8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
Mmp28Q8CGV8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Mmp28Q8CGV8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Mmp28Q8CGV8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Mmp28Q8CGV8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp28Q8CGV8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp28Q8CGV8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Mmp28Q8CGV8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp28Q8CGV8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp28Q8CGV8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
Mmp28Q8CGV8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Mmp28Q8CGV8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp28Q8CGV8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mmp28Q8CGV8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mmp28Q8CGV8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Mmp28Q8CGV8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp28Q8CGV8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.15■□□□□ 0.5
Mmp28Q8CGV8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp28Q8CGV8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mmp28Q8CGV8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Mmp28Q8CGV8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Mmp28Q8CGV8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Mmp28Q8CGV8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp28Q8CGV8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp28Q8CGV8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp28Q8CGV8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.14■□□□□ 0.49
Mmp28Q8CGV8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp28Q8CGV8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mmp28Q8CGV8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp28Q8CGV8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Mmp28Q8CGV8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp28Q8CGV8 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.13■□□□□ 0.49
Mmp28Q8CGV8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp28Q8CGV8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp28Q8CGV8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp28Q8CGV8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp28Q8CGV8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp28Q8CGV8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Mmp28Q8CGV8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp28Q8CGV8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mmp28Q8CGV8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mmp28Q8CGV8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mmp28Q8CGV8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mmp28Q8CGV8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Mmp28Q8CGV8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mmp28Q8CGV8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mmp28Q8CGV8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp28Q8CGV8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Mmp28Q8CGV8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp28Q8CGV8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp28Q8CGV8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Mmp28Q8CGV8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp28Q8CGV8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp28Q8CGV8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Mmp28Q8CGV8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp28Q8CGV8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp28Q8CGV8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp28Q8CGV8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp28Q8CGV8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms