Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rab43Q8CG50 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rab43Q8CG50 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.01■□□□□ 0.95
Rab43Q8CG50 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Rab43Q8CG50 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab43Q8CG50 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rab43Q8CG50 Gm9847-201ENSMUST00000052528 599 ntBASIC21.01■□□□□ 0.95
Rab43Q8CG50 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab43Q8CG50 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.01■□□□□ 0.95
Rab43Q8CG50 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab43Q8CG50 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab43Q8CG50 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21■□□□□ 0.95
Rab43Q8CG50 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rab43Q8CG50 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.99■□□□□ 0.95
Rab43Q8CG50 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab43Q8CG50 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab43Q8CG50 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab43Q8CG50 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rab43Q8CG50 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rab43Q8CG50 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab43Q8CG50 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab43Q8CG50 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.98■□□□□ 0.95
Rab43Q8CG50 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab43Q8CG50 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab43Q8CG50 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rab43Q8CG50 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab43Q8CG50 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab43Q8CG50 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rab43Q8CG50 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab43Q8CG50 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rab43Q8CG50 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab43Q8CG50 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab43Q8CG50 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rab43Q8CG50 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab43Q8CG50 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab43Q8CG50 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rab43Q8CG50 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.96■□□□□ 0.95
Rab43Q8CG50 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab43Q8CG50 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.96■□□□□ 0.95
Rab43Q8CG50 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.96■□□□□ 0.95
Rab43Q8CG50 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rab43Q8CG50 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rab43Q8CG50 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab43Q8CG50 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Rab43Q8CG50 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rab43Q8CG50 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab43Q8CG50 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rab43Q8CG50 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rab43Q8CG50 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rab43Q8CG50 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab43Q8CG50 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rab43Q8CG50 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rab43Q8CG50 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rab43Q8CG50 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rab43Q8CG50 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rab43Q8CG50 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab43Q8CG50 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rab43Q8CG50 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.93■□□□□ 0.94
Rab43Q8CG50 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rab43Q8CG50 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Rab43Q8CG50 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab43Q8CG50 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rab43Q8CG50 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab43Q8CG50 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab43Q8CG50 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rab43Q8CG50 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab43Q8CG50 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rab43Q8CG50 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rab43Q8CG50 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.91■□□□□ 0.94
Rab43Q8CG50 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rab43Q8CG50 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rab43Q8CG50 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rab43Q8CG50 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab43Q8CG50 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rab43Q8CG50 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rab43Q8CG50 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rab43Q8CG50 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rab43Q8CG50 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rab43Q8CG50 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rab43Q8CG50 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rab43Q8CG50 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.89■□□□□ 0.93
Rab43Q8CG50 Gm12922-201ENSMUST00000120626 809 ntBASIC20.89■□□□□ 0.93
Rab43Q8CG50 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rab43Q8CG50 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rab43Q8CG50 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rab43Q8CG50 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.88■□□□□ 0.93
Rab43Q8CG50 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab43Q8CG50 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rab43Q8CG50 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab43Q8CG50 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab43Q8CG50 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab43Q8CG50 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab43Q8CG50 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rab43Q8CG50 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab43Q8CG50 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab43Q8CG50 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab43Q8CG50 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab43Q8CG50 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab43Q8CG50 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rab43Q8CG50 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms