Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC27.03■■□□□ 1.92
Trim52Q8CDV4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Trim52Q8CDV4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
Trim52Q8CDV4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Trim52Q8CDV4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Trim52Q8CDV4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Trim52Q8CDV4 Gm22238-201ENSMUST00000175222 88 ntBASIC27.01■■□□□ 1.91
Trim52Q8CDV4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Trim52Q8CDV4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC27■■□□□ 1.91
Trim52Q8CDV4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trim52Q8CDV4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trim52Q8CDV4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC26.99■■□□□ 1.91
Trim52Q8CDV4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trim52Q8CDV4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trim52Q8CDV4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC26.98■■□□□ 1.91
Trim52Q8CDV4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Trim52Q8CDV4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trim52Q8CDV4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trim52Q8CDV4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trim52Q8CDV4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trim52Q8CDV4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
Trim52Q8CDV4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trim52Q8CDV4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
Trim52Q8CDV4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Trim52Q8CDV4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC26.96■■□□□ 1.91
Trim52Q8CDV4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trim52Q8CDV4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Trim52Q8CDV4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
Trim52Q8CDV4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
Trim52Q8CDV4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Trim52Q8CDV4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
Trim52Q8CDV4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim52Q8CDV4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
Trim52Q8CDV4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Trim52Q8CDV4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim52Q8CDV4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim52Q8CDV4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim52Q8CDV4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trim52Q8CDV4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Trim52Q8CDV4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trim52Q8CDV4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trim52Q8CDV4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim52Q8CDV4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Trim52Q8CDV4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Trim52Q8CDV4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.92■■□□□ 1.9
Trim52Q8CDV4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim52Q8CDV4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim52Q8CDV4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim52Q8CDV4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim52Q8CDV4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim52Q8CDV4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim52Q8CDV4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Trim52Q8CDV4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Trim52Q8CDV4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim52Q8CDV4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim52Q8CDV4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim52Q8CDV4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim52Q8CDV4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim52Q8CDV4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim52Q8CDV4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim52Q8CDV4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Trim52Q8CDV4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Trim52Q8CDV4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Trim52Q8CDV4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim52Q8CDV4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.88■■□□□ 1.89
Trim52Q8CDV4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Trim52Q8CDV4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim52Q8CDV4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.88■■□□□ 1.89
Trim52Q8CDV4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Trim52Q8CDV4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Trim52Q8CDV4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC26.87■■□□□ 1.89
Trim52Q8CDV4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Trim52Q8CDV4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Trim52Q8CDV4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Trim52Q8CDV4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
Trim52Q8CDV4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Trim52Q8CDV4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Trim52Q8CDV4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Trim52Q8CDV4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Trim52Q8CDV4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC26.84■■□□□ 1.89
Trim52Q8CDV4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Trim52Q8CDV4 Gm10620-201ENSMUST00000098379 1332 ntBASIC26.84■■□□□ 1.89
Trim52Q8CDV4 Gm13241-201ENSMUST00000094493 780 ntBASIC26.83■■□□□ 1.89
Trim52Q8CDV4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Trim52Q8CDV4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Trim52Q8CDV4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Trim52Q8CDV4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Trim52Q8CDV4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Trim52Q8CDV4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trim52Q8CDV4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trim52Q8CDV4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
Trim52Q8CDV4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trim52Q8CDV4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trim52Q8CDV4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trim52Q8CDV4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
Trim52Q8CDV4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Trim52Q8CDV4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC26.8■■□□□ 1.88
Trim52Q8CDV4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Trim52Q8CDV4 Gm21956-201ENSMUST00000179946 522 ntBASIC26.8■■□□□ 1.88
Trim52Q8CDV4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms