Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd4Q8CC84 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd4Q8CC84 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd4Q8CC84 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Lysmd4Q8CC84 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lysmd4Q8CC84 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lysmd4Q8CC84 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lysmd4Q8CC84 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd4Q8CC84 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd4Q8CC84 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd4Q8CC84 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lysmd4Q8CC84 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd4Q8CC84 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd4Q8CC84 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
Lysmd4Q8CC84 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lysmd4Q8CC84 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
Lysmd4Q8CC84 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Lysmd4Q8CC84 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd4Q8CC84 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd4Q8CC84 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd4Q8CC84 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd4Q8CC84 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd4Q8CC84 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd4Q8CC84 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd4Q8CC84 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lysmd4Q8CC84 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd4Q8CC84 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lysmd4Q8CC84 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd4Q8CC84 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd4Q8CC84 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd4Q8CC84 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.23■□□□□ 0.67
Lysmd4Q8CC84 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd4Q8CC84 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd4Q8CC84 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd4Q8CC84 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd4Q8CC84 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd4Q8CC84 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd4Q8CC84 Gm7432-201ENSMUST00000210343 879 ntBASIC19.22■□□□□ 0.67
Lysmd4Q8CC84 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd4Q8CC84 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd4Q8CC84 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Lysmd4Q8CC84 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd4Q8CC84 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd4Q8CC84 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd4Q8CC84 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd4Q8CC84 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.2■□□□□ 0.66
Lysmd4Q8CC84 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd4Q8CC84 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd4Q8CC84 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lysmd4Q8CC84 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lysmd4Q8CC84 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lysmd4Q8CC84 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.19■□□□□ 0.66
Lysmd4Q8CC84 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lysmd4Q8CC84 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lysmd4Q8CC84 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.19■□□□□ 0.66
Lysmd4Q8CC84 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lysmd4Q8CC84 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lysmd4Q8CC84 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.18■□□□□ 0.66
Lysmd4Q8CC84 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd4Q8CC84 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Lysmd4Q8CC84 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.18■□□□□ 0.66
Lysmd4Q8CC84 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd4Q8CC84 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd4Q8CC84 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd4Q8CC84 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd4Q8CC84 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd4Q8CC84 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.17■□□□□ 0.66
Lysmd4Q8CC84 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.17■□□□□ 0.66
Lysmd4Q8CC84 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd4Q8CC84 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd4Q8CC84 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lysmd4Q8CC84 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd4Q8CC84 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Lysmd4Q8CC84 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lysmd4Q8CC84 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd4Q8CC84 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd4Q8CC84 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Lysmd4Q8CC84 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd4Q8CC84 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lysmd4Q8CC84 Gm11599-201ENSMUST00000118720 878 ntBASIC19.15■□□□□ 0.66
Lysmd4Q8CC84 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.15■□□□□ 0.66
Lysmd4Q8CC84 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd4Q8CC84 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd4Q8CC84 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd4Q8CC84 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd4Q8CC84 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd4Q8CC84 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd4Q8CC84 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Lysmd4Q8CC84 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.14■□□□□ 0.65
Lysmd4Q8CC84 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.14■□□□□ 0.65
Lysmd4Q8CC84 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.14■□□□□ 0.65
Lysmd4Q8CC84 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Lysmd4Q8CC84 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd4Q8CC84 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd4Q8CC84 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd4Q8CC84 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd4Q8CC84 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Lysmd4Q8CC84 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.13■□□□□ 0.65
Lysmd4Q8CC84 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.13■□□□□ 0.65
Lysmd4Q8CC84 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms