Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
Sh3rf2Q8BZT2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3rf2Q8BZT2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3rf2Q8BZT2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.88■■□□□ 1.09
Sh3rf2Q8BZT2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3rf2Q8BZT2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sh3rf2Q8BZT2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Sh3rf2Q8BZT2 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.88■■□□□ 1.09
Sh3rf2Q8BZT2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3rf2Q8BZT2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3rf2Q8BZT2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3rf2Q8BZT2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3rf2Q8BZT2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3rf2Q8BZT2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3rf2Q8BZT2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3rf2Q8BZT2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sh3rf2Q8BZT2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.86■■□□□ 1.09
Sh3rf2Q8BZT2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.86■■□□□ 1.09
Sh3rf2Q8BZT2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.86■■□□□ 1.09
Sh3rf2Q8BZT2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sh3rf2Q8BZT2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.86■■□□□ 1.09
Sh3rf2Q8BZT2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Sh3rf2Q8BZT2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sh3rf2Q8BZT2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.84■■□□□ 1.09
Sh3rf2Q8BZT2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sh3rf2Q8BZT2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sh3rf2Q8BZT2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.84■■□□□ 1.09
Sh3rf2Q8BZT2 Gm40881-201ENSMUST00000223397 166 ntBASIC21.84■■□□□ 1.09
Sh3rf2Q8BZT2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sh3rf2Q8BZT2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.84■■□□□ 1.09
Sh3rf2Q8BZT2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Sh3rf2Q8BZT2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sh3rf2Q8BZT2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sh3rf2Q8BZT2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Sh3rf2Q8BZT2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.83■■□□□ 1.09
Sh3rf2Q8BZT2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
Sh3rf2Q8BZT2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Sh3rf2Q8BZT2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Sh3rf2Q8BZT2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sh3rf2Q8BZT2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.82■■□□□ 1.08
Sh3rf2Q8BZT2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Sh3rf2Q8BZT2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.82■■□□□ 1.08
Sh3rf2Q8BZT2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sh3rf2Q8BZT2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sh3rf2Q8BZT2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Sh3rf2Q8BZT2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3rf2Q8BZT2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3rf2Q8BZT2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3rf2Q8BZT2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3rf2Q8BZT2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3rf2Q8BZT2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sh3rf2Q8BZT2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3rf2Q8BZT2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Sh3rf2Q8BZT2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3rf2Q8BZT2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Sh3rf2Q8BZT2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.8■■□□□ 1.08
Sh3rf2Q8BZT2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3rf2Q8BZT2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Sh3rf2Q8BZT2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sh3rf2Q8BZT2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3rf2Q8BZT2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3rf2Q8BZT2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.79■■□□□ 1.08
Sh3rf2Q8BZT2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3rf2Q8BZT2 Gm10399-202ENSMUST00000202768 748 ntBASIC21.79■■□□□ 1.08
Sh3rf2Q8BZT2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Sh3rf2Q8BZT2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3rf2Q8BZT2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sh3rf2Q8BZT2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3rf2Q8BZT2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
Sh3rf2Q8BZT2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.78■■□□□ 1.08
Sh3rf2Q8BZT2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Sh3rf2Q8BZT2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3rf2Q8BZT2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3rf2Q8BZT2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sh3rf2Q8BZT2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sh3rf2Q8BZT2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.77■■□□□ 1.08
Sh3rf2Q8BZT2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3rf2Q8BZT2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3rf2Q8BZT2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3rf2Q8BZT2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sh3rf2Q8BZT2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3rf2Q8BZT2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.75■■□□□ 1.07
Sh3rf2Q8BZT2 Gm15039-201ENSMUST00000118914 875 ntBASIC21.75■■□□□ 1.07
Sh3rf2Q8BZT2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.75■■□□□ 1.07
Sh3rf2Q8BZT2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3rf2Q8BZT2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Sh3rf2Q8BZT2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3rf2Q8BZT2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3rf2Q8BZT2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sh3rf2Q8BZT2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3rf2Q8BZT2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3rf2Q8BZT2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3rf2Q8BZT2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3rf2Q8BZT2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3rf2Q8BZT2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3rf2Q8BZT2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3rf2Q8BZT2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Sh3rf2Q8BZT2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3rf2Q8BZT2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sh3rf2Q8BZT2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms