Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tdp1Q8BJ37 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tdp1Q8BJ37 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tdp1Q8BJ37 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tdp1Q8BJ37 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tdp1Q8BJ37 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tdp1Q8BJ37 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Tdp1Q8BJ37 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tdp1Q8BJ37 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Tdp1Q8BJ37 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tdp1Q8BJ37 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Tdp1Q8BJ37 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Tdp1Q8BJ37 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.97■■□□□ 1.43
Tdp1Q8BJ37 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Tdp1Q8BJ37 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Tdp1Q8BJ37 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Tdp1Q8BJ37 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Tdp1Q8BJ37 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Tdp1Q8BJ37 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Tdp1Q8BJ37 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Tdp1Q8BJ37 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Tdp1Q8BJ37 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Tdp1Q8BJ37 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Tdp1Q8BJ37 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Tdp1Q8BJ37 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.95■■□□□ 1.42
Tdp1Q8BJ37 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tdp1Q8BJ37 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tdp1Q8BJ37 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tdp1Q8BJ37 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.95■■□□□ 1.42
Tdp1Q8BJ37 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tdp1Q8BJ37 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tdp1Q8BJ37 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Tdp1Q8BJ37 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Tdp1Q8BJ37 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Tdp1Q8BJ37 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Tdp1Q8BJ37 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Tdp1Q8BJ37 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Tdp1Q8BJ37 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Tdp1Q8BJ37 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Tdp1Q8BJ37 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Tdp1Q8BJ37 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Tdp1Q8BJ37 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Tdp1Q8BJ37 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Tdp1Q8BJ37 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Tdp1Q8BJ37 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Tdp1Q8BJ37 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.92■■□□□ 1.42
Tdp1Q8BJ37 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Tdp1Q8BJ37 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.91■■□□□ 1.42
Tdp1Q8BJ37 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.91■■□□□ 1.42
Tdp1Q8BJ37 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
Tdp1Q8BJ37 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Tdp1Q8BJ37 Gm12922-201ENSMUST00000120626 809 ntBASIC23.9■■□□□ 1.42
Tdp1Q8BJ37 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Tdp1Q8BJ37 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.9■■□□□ 1.42
Tdp1Q8BJ37 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Tdp1Q8BJ37 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Tdp1Q8BJ37 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.41
Tdp1Q8BJ37 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Tdp1Q8BJ37 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Tdp1Q8BJ37 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Tdp1Q8BJ37 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.88■■□□□ 1.41
Tdp1Q8BJ37 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Tdp1Q8BJ37 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.87■■□□□ 1.41
Tdp1Q8BJ37 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.87■■□□□ 1.41
Tdp1Q8BJ37 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Tdp1Q8BJ37 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.87■■□□□ 1.41
Tdp1Q8BJ37 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Tdp1Q8BJ37 Gm10620-201ENSMUST00000098379 1332 ntBASIC23.86■■□□□ 1.41
Tdp1Q8BJ37 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tdp1Q8BJ37 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.86■■□□□ 1.41
Tdp1Q8BJ37 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.86■■□□□ 1.41
Tdp1Q8BJ37 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Tdp1Q8BJ37 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Tdp1Q8BJ37 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Tdp1Q8BJ37 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Tdp1Q8BJ37 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Tdp1Q8BJ37 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.84■■□□□ 1.41
Tdp1Q8BJ37 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tdp1Q8BJ37 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tdp1Q8BJ37 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tdp1Q8BJ37 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC23.83■■□□□ 1.41
Tdp1Q8BJ37 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.83■■□□□ 1.41
Tdp1Q8BJ37 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.83■■□□□ 1.41
Tdp1Q8BJ37 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Tdp1Q8BJ37 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Tdp1Q8BJ37 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Tdp1Q8BJ37 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.82■■□□□ 1.4
Tdp1Q8BJ37 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.82■■□□□ 1.4
Tdp1Q8BJ37 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.82■■□□□ 1.4
Tdp1Q8BJ37 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Tdp1Q8BJ37 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tdp1Q8BJ37 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Tdp1Q8BJ37 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC23.81■■□□□ 1.4
Tdp1Q8BJ37 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tdp1Q8BJ37 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tdp1Q8BJ37 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tdp1Q8BJ37 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Tdp1Q8BJ37 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Tdp1Q8BJ37 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Tdp1Q8BJ37 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms