Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp6nlQ80XC3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp6nlQ80XC3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp6nlQ80XC3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp6nlQ80XC3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.92■■□□□ 1.42
Usp6nlQ80XC3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.92■■□□□ 1.42
Usp6nlQ80XC3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.92■■□□□ 1.42
Usp6nlQ80XC3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp6nlQ80XC3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp6nlQ80XC3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp6nlQ80XC3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp6nlQ80XC3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp6nlQ80XC3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp6nlQ80XC3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp6nlQ80XC3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Usp6nlQ80XC3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.91■■□□□ 1.42
Usp6nlQ80XC3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp6nlQ80XC3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Usp6nlQ80XC3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp6nlQ80XC3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Usp6nlQ80XC3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Usp6nlQ80XC3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.9■■□□□ 1.42
Usp6nlQ80XC3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.9■■□□□ 1.42
Usp6nlQ80XC3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
Usp6nlQ80XC3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.89■■□□□ 1.42
Usp6nlQ80XC3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Usp6nlQ80XC3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp6nlQ80XC3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp6nlQ80XC3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Usp6nlQ80XC3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.88■■□□□ 1.41
Usp6nlQ80XC3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Usp6nlQ80XC3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Usp6nlQ80XC3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Usp6nlQ80XC3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Usp6nlQ80XC3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Usp6nlQ80XC3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Usp6nlQ80XC3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Usp6nlQ80XC3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Usp6nlQ80XC3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC23.86■■□□□ 1.41
Usp6nlQ80XC3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Usp6nlQ80XC3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Usp6nlQ80XC3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.85■■□□□ 1.41
Usp6nlQ80XC3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Usp6nlQ80XC3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.85■■□□□ 1.41
Usp6nlQ80XC3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Usp6nlQ80XC3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Usp6nlQ80XC3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Usp6nlQ80XC3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.84■■□□□ 1.41
Usp6nlQ80XC3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Usp6nlQ80XC3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Usp6nlQ80XC3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Usp6nlQ80XC3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Usp6nlQ80XC3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Usp6nlQ80XC3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
Usp6nlQ80XC3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp6nlQ80XC3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp6nlQ80XC3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Usp6nlQ80XC3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp6nlQ80XC3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.82■■□□□ 1.4
Usp6nlQ80XC3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp6nlQ80XC3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Usp6nlQ80XC3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Usp6nlQ80XC3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Usp6nlQ80XC3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Usp6nlQ80XC3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Usp6nlQ80XC3 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.81■■□□□ 1.4
Usp6nlQ80XC3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Usp6nlQ80XC3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Usp6nlQ80XC3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Usp6nlQ80XC3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.8■■□□□ 1.4
Usp6nlQ80XC3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Usp6nlQ80XC3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Usp6nlQ80XC3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.79■■□□□ 1.4
Usp6nlQ80XC3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.79■■□□□ 1.4
Usp6nlQ80XC3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp6nlQ80XC3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Usp6nlQ80XC3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp6nlQ80XC3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp6nlQ80XC3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.78■■□□□ 1.4
Usp6nlQ80XC3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Usp6nlQ80XC3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp6nlQ80XC3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Usp6nlQ80XC3 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.78■■□□□ 1.4
Usp6nlQ80XC3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Usp6nlQ80XC3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
Usp6nlQ80XC3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp6nlQ80XC3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp6nlQ80XC3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp6nlQ80XC3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Usp6nlQ80XC3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp6nlQ80XC3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp6nlQ80XC3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.76■■□□□ 1.39
Usp6nlQ80XC3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC23.76■■□□□ 1.39
Usp6nlQ80XC3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp6nlQ80XC3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp6nlQ80XC3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.75■■□□□ 1.39
Usp6nlQ80XC3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp6nlQ80XC3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp6nlQ80XC3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.75■■□□□ 1.39
Usp6nlQ80XC3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms