Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trim62Q80V85 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim62Q80V85 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.27■■□□□ 1.16
Trim62Q80V85 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Trim62Q80V85 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.27■■□□□ 1.16
Trim62Q80V85 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.27■■□□□ 1.16
Trim62Q80V85 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim62Q80V85 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Trim62Q80V85 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim62Q80V85 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim62Q80V85 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trim62Q80V85 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trim62Q80V85 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim62Q80V85 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.25■■□□□ 1.15
Trim62Q80V85 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim62Q80V85 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim62Q80V85 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim62Q80V85 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Trim62Q80V85 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim62Q80V85 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Trim62Q80V85 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Trim62Q80V85 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Trim62Q80V85 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim62Q80V85 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Trim62Q80V85 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim62Q80V85 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Trim62Q80V85 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim62Q80V85 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trim62Q80V85 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.24■■□□□ 1.15
Trim62Q80V85 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.24■■□□□ 1.15
Trim62Q80V85 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Trim62Q80V85 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim62Q80V85 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trim62Q80V85 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim62Q80V85 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.24■■□□□ 1.15
Trim62Q80V85 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim62Q80V85 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim62Q80V85 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Trim62Q80V85 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim62Q80V85 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim62Q80V85 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.23■■□□□ 1.15
Trim62Q80V85 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trim62Q80V85 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim62Q80V85 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trim62Q80V85 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Trim62Q80V85 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.22■■□□□ 1.15
Trim62Q80V85 Gm5812-201ENSMUST00000061073 957 ntBASIC22.22■■□□□ 1.15
Trim62Q80V85 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Trim62Q80V85 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim62Q80V85 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Trim62Q80V85 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Trim62Q80V85 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim62Q80V85 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.21■■□□□ 1.15
Trim62Q80V85 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.21■■□□□ 1.15
Trim62Q80V85 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim62Q80V85 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
Trim62Q80V85 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Trim62Q80V85 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Trim62Q80V85 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Trim62Q80V85 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.15
Trim62Q80V85 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Trim62Q80V85 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Trim62Q80V85 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim62Q80V85 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Trim62Q80V85 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim62Q80V85 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim62Q80V85 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Trim62Q80V85 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim62Q80V85 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim62Q80V85 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.19■■□□□ 1.14
Trim62Q80V85 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim62Q80V85 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim62Q80V85 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim62Q80V85 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim62Q80V85 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.18■■□□□ 1.14
Trim62Q80V85 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim62Q80V85 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim62Q80V85 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim62Q80V85 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.17■■□□□ 1.14
Trim62Q80V85 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
Trim62Q80V85 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trim62Q80V85 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Trim62Q80V85 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trim62Q80V85 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim62Q80V85 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.17■■□□□ 1.14
Trim62Q80V85 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Trim62Q80V85 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trim62Q80V85 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.16■■□□□ 1.14
Trim62Q80V85 Gm10232-201ENSMUST00000089221 720 ntBASIC22.16■■□□□ 1.14
Trim62Q80V85 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.16■■□□□ 1.14
Trim62Q80V85 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim62Q80V85 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trim62Q80V85 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim62Q80V85 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Trim62Q80V85 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim62Q80V85 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim62Q80V85 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim62Q80V85 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim62Q80V85 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim62Q80V85 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms