Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh8Q7TSK3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdh8Q7TSK3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdh8Q7TSK3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh8Q7TSK3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdh8Q7TSK3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdh8Q7TSK3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh8Q7TSK3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh8Q7TSK3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh8Q7TSK3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdh8Q7TSK3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdh8Q7TSK3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh8Q7TSK3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh8Q7TSK3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh8Q7TSK3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Pcdh8Q7TSK3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh8Q7TSK3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdh8Q7TSK3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdh8Q7TSK3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh8Q7TSK3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdh8Q7TSK3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh8Q7TSK3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdh8Q7TSK3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh8Q7TSK3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh8Q7TSK3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh8Q7TSK3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh8Q7TSK3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh8Q7TSK3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh8Q7TSK3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh8Q7TSK3 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.1■□□□□ 0.97
Pcdh8Q7TSK3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh8Q7TSK3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh8Q7TSK3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
Pcdh8Q7TSK3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh8Q7TSK3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh8Q7TSK3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh8Q7TSK3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh8Q7TSK3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh8Q7TSK3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Pcdh8Q7TSK3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdh8Q7TSK3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh8Q7TSK3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh8Q7TSK3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh8Q7TSK3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh8Q7TSK3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh8Q7TSK3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdh8Q7TSK3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh8Q7TSK3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh8Q7TSK3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Pcdh8Q7TSK3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.08■□□□□ 0.97
Pcdh8Q7TSK3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.08■□□□□ 0.97
Pcdh8Q7TSK3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh8Q7TSK3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh8Q7TSK3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh8Q7TSK3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh8Q7TSK3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh8Q7TSK3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Pcdh8Q7TSK3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Pcdh8Q7TSK3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.08■□□□□ 0.96
Pcdh8Q7TSK3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh8Q7TSK3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh8Q7TSK3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdh8Q7TSK3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.07■□□□□ 0.96
Pcdh8Q7TSK3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdh8Q7TSK3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdh8Q7TSK3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Pcdh8Q7TSK3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh8Q7TSK3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Pcdh8Q7TSK3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh8Q7TSK3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh8Q7TSK3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh8Q7TSK3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh8Q7TSK3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh8Q7TSK3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pcdh8Q7TSK3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.06■□□□□ 0.96
Pcdh8Q7TSK3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdh8Q7TSK3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdh8Q7TSK3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh8Q7TSK3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh8Q7TSK3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh8Q7TSK3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh8Q7TSK3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh8Q7TSK3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh8Q7TSK3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.05■□□□□ 0.96
Pcdh8Q7TSK3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh8Q7TSK3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh8Q7TSK3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh8Q7TSK3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh8Q7TSK3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh8Q7TSK3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Pcdh8Q7TSK3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdh8Q7TSK3 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.04■□□□□ 0.96
Pcdh8Q7TSK3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh8Q7TSK3 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.04■□□□□ 0.96
Pcdh8Q7TSK3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh8Q7TSK3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh8Q7TSK3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh8Q7TSK3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh8Q7TSK3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh8Q7TSK3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms