Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
AtmQ62388 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AtmQ62388 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
AtmQ62388 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AtmQ62388 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
AtmQ62388 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AtmQ62388 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
AtmQ62388 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
AtmQ62388 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AtmQ62388 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
AtmQ62388 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
AtmQ62388 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AtmQ62388 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AtmQ62388 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.8■□□□□ 0.92
AtmQ62388 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.8■□□□□ 0.92
AtmQ62388 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AtmQ62388 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
AtmQ62388 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
AtmQ62388 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.8■□□□□ 0.92
AtmQ62388 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AtmQ62388 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AtmQ62388 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AtmQ62388 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AtmQ62388 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AtmQ62388 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.79■□□□□ 0.92
AtmQ62388 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AtmQ62388 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AtmQ62388 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.79■□□□□ 0.92
AtmQ62388 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AtmQ62388 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
AtmQ62388 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
AtmQ62388 Gm5874-201ENSMUST00000096101 508 ntBASIC20.78■□□□□ 0.92
AtmQ62388 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AtmQ62388 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AtmQ62388 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
AtmQ62388 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
AtmQ62388 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AtmQ62388 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
AtmQ62388 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AtmQ62388 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.76■□□□□ 0.91
AtmQ62388 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AtmQ62388 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AtmQ62388 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AtmQ62388 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AtmQ62388 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
AtmQ62388 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AtmQ62388 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AtmQ62388 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
AtmQ62388 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AtmQ62388 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AtmQ62388 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AtmQ62388 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
AtmQ62388 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AtmQ62388 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
AtmQ62388 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AtmQ62388 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AtmQ62388 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AtmQ62388 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
AtmQ62388 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AtmQ62388 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AtmQ62388 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.74■□□□□ 0.91
AtmQ62388 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
AtmQ62388 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AtmQ62388 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AtmQ62388 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AtmQ62388 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AtmQ62388 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AtmQ62388 Gm26571-201ENSMUST00000181399 666 ntBASIC20.73■□□□□ 0.91
AtmQ62388 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
AtmQ62388 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AtmQ62388 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AtmQ62388 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AtmQ62388 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
AtmQ62388 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AtmQ62388 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.72■□□□□ 0.91
AtmQ62388 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AtmQ62388 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AtmQ62388 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.72■□□□□ 0.91
AtmQ62388 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.72■□□□□ 0.91
AtmQ62388 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AtmQ62388 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.71■□□□□ 0.91
AtmQ62388 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
AtmQ62388 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AtmQ62388 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AtmQ62388 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.71■□□□□ 0.91
AtmQ62388 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.71■□□□□ 0.91
AtmQ62388 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
AtmQ62388 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AtmQ62388 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AtmQ62388 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
AtmQ62388 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AtmQ62388 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AtmQ62388 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.7■□□□□ 0.9
AtmQ62388 Gm10399-202ENSMUST00000202768 748 ntBASIC20.7■□□□□ 0.9
AtmQ62388 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
AtmQ62388 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AtmQ62388 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AtmQ62388 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AtmQ62388 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AtmQ62388 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 137.5 ms