Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Itm2aQ61500 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Itm2aQ61500 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Itm2aQ61500 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Itm2aQ61500 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Itm2aQ61500 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Itm2aQ61500 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.1■□□□□ 0.97
Itm2aQ61500 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.1■□□□□ 0.97
Itm2aQ61500 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Itm2aQ61500 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Itm2aQ61500 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Itm2aQ61500 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Itm2aQ61500 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Itm2aQ61500 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Itm2aQ61500 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Itm2aQ61500 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Itm2aQ61500 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Itm2aQ61500 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Itm2aQ61500 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.07■□□□□ 0.96
Itm2aQ61500 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Itm2aQ61500 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Itm2aQ61500 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.07■□□□□ 0.96
Itm2aQ61500 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Itm2aQ61500 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Itm2aQ61500 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Itm2aQ61500 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.06■□□□□ 0.96
Itm2aQ61500 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Itm2aQ61500 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Itm2aQ61500 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Itm2aQ61500 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Itm2aQ61500 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.05■□□□□ 0.96
Itm2aQ61500 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Itm2aQ61500 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Itm2aQ61500 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Itm2aQ61500 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.05■□□□□ 0.96
Itm2aQ61500 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Itm2aQ61500 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Itm2aQ61500 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Itm2aQ61500 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Itm2aQ61500 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Itm2aQ61500 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.03■□□□□ 0.96
Itm2aQ61500 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Itm2aQ61500 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Itm2aQ61500 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Itm2aQ61500 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.03■□□□□ 0.96
Itm2aQ61500 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Itm2aQ61500 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
Itm2aQ61500 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Itm2aQ61500 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Itm2aQ61500 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Itm2aQ61500 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Itm2aQ61500 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Itm2aQ61500 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Itm2aQ61500 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Itm2aQ61500 Gm7432-201ENSMUST00000210343 879 ntBASIC21.01■□□□□ 0.95
Itm2aQ61500 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Itm2aQ61500 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Itm2aQ61500 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Itm2aQ61500 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Itm2aQ61500 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Itm2aQ61500 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.01■□□□□ 0.95
Itm2aQ61500 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Itm2aQ61500 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21■□□□□ 0.95
Itm2aQ61500 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21■□□□□ 0.95
Itm2aQ61500 Pkd1-207ENSMUST00000228550 1050 ntBASIC21■□□□□ 0.95
Itm2aQ61500 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Itm2aQ61500 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Itm2aQ61500 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Itm2aQ61500 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Itm2aQ61500 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.99■□□□□ 0.95
Itm2aQ61500 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Itm2aQ61500 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Itm2aQ61500 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Itm2aQ61500 Gm11599-201ENSMUST00000118720 878 ntBASIC20.99■□□□□ 0.95
Itm2aQ61500 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Itm2aQ61500 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Itm2aQ61500 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
Itm2aQ61500 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Itm2aQ61500 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Itm2aQ61500 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Itm2aQ61500 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Itm2aQ61500 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Itm2aQ61500 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Itm2aQ61500 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Itm2aQ61500 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Itm2aQ61500 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Itm2aQ61500 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Itm2aQ61500 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Itm2aQ61500 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Itm2aQ61500 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Itm2aQ61500 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Itm2aQ61500 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Itm2aQ61500 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.96■□□□□ 0.95
Itm2aQ61500 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Itm2aQ61500 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.96■□□□□ 0.95
Itm2aQ61500 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Itm2aQ61500 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Itm2aQ61500 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
Itm2aQ61500 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Itm2aQ61500 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 430 ms