Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hcfc1Q61191 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hcfc1Q61191 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Hcfc1Q61191 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hcfc1Q61191 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.43■□□□□ 0.54
Hcfc1Q61191 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcfc1Q61191 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.42■□□□□ 0.54
Hcfc1Q61191 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Hcfc1Q61191 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.42■□□□□ 0.54
Hcfc1Q61191 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hcfc1Q61191 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcfc1Q61191 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcfc1Q61191 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcfc1Q61191 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcfc1Q61191 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hcfc1Q61191 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcfc1Q61191 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcfc1Q61191 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.4■□□□□ 0.54
Hcfc1Q61191 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.4■□□□□ 0.54
Hcfc1Q61191 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hcfc1Q61191 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Hcfc1Q61191 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hcfc1Q61191 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Hcfc1Q61191 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hcfc1Q61191 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hcfc1Q61191 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.39■□□□□ 0.53
Hcfc1Q61191 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Hcfc1Q61191 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.39■□□□□ 0.53
Hcfc1Q61191 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hcfc1Q61191 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hcfc1Q61191 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.38■□□□□ 0.53
Hcfc1Q61191 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.38■□□□□ 0.53
Hcfc1Q61191 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.38■□□□□ 0.53
Hcfc1Q61191 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.38■□□□□ 0.53
Hcfc1Q61191 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hcfc1Q61191 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hcfc1Q61191 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hcfc1Q61191 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
Hcfc1Q61191 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1Q61191 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1Q61191 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Hcfc1Q61191 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.37■□□□□ 0.53
Hcfc1Q61191 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1Q61191 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1Q61191 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1Q61191 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1Q61191 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.36■□□□□ 0.53
Hcfc1Q61191 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcfc1Q61191 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcfc1Q61191 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.36■□□□□ 0.53
Hcfc1Q61191 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hcfc1Q61191 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hcfc1Q61191 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcfc1Q61191 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcfc1Q61191 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcfc1Q61191 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Hcfc1Q61191 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcfc1Q61191 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcfc1Q61191 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hcfc1Q61191 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcfc1Q61191 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hcfc1Q61191 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hcfc1Q61191 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Hcfc1Q61191 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Hcfc1Q61191 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hcfc1Q61191 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Hcfc1Q61191 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcfc1Q61191 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcfc1Q61191 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.34■□□□□ 0.53
Hcfc1Q61191 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcfc1Q61191 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hcfc1Q61191 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hcfc1Q61191 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.33■□□□□ 0.53
Hcfc1Q61191 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Hcfc1Q61191 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hcfc1Q61191 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.33■□□□□ 0.52
Hcfc1Q61191 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Hcfc1Q61191 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hcfc1Q61191 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Hcfc1Q61191 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcfc1Q61191 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.32■□□□□ 0.52
Hcfc1Q61191 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Hcfc1Q61191 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcfc1Q61191 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Hcfc1Q61191 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcfc1Q61191 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcfc1Q61191 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
Hcfc1Q61191 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hcfc1Q61191 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcfc1Q61191 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcfc1Q61191 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcfc1Q61191 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Hcfc1Q61191 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1Q61191 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.3■□□□□ 0.52
Hcfc1Q61191 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1Q61191 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1Q61191 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1Q61191 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1Q61191 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.3■□□□□ 0.52
Hcfc1Q61191 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 115.4 ms