Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Tmem40Q4FJU9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem40Q4FJU9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tmem40Q4FJU9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.22■□□□□ 0.51
Tmem40Q4FJU9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem40Q4FJU9 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.22■□□□□ 0.51
Tmem40Q4FJU9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem40Q4FJU9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem40Q4FJU9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem40Q4FJU9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem40Q4FJU9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Tmem40Q4FJU9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem40Q4FJU9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.21■□□□□ 0.51
Tmem40Q4FJU9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem40Q4FJU9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.21■□□□□ 0.5
Tmem40Q4FJU9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tmem40Q4FJU9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem40Q4FJU9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem40Q4FJU9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem40Q4FJU9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem40Q4FJU9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem40Q4FJU9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem40Q4FJU9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.19■□□□□ 0.5
Tmem40Q4FJU9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.19■□□□□ 0.5
Tmem40Q4FJU9 Gm7417-201ENSMUST00000192950 473 ntBASIC18.19■□□□□ 0.5
Tmem40Q4FJU9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem40Q4FJU9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem40Q4FJU9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem40Q4FJU9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem40Q4FJU9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem40Q4FJU9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem40Q4FJU9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem40Q4FJU9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem40Q4FJU9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem40Q4FJU9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.18■□□□□ 0.5
Tmem40Q4FJU9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.18■□□□□ 0.5
Tmem40Q4FJU9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Tmem40Q4FJU9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem40Q4FJU9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tmem40Q4FJU9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem40Q4FJU9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmem40Q4FJU9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmem40Q4FJU9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tmem40Q4FJU9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmem40Q4FJU9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.17■□□□□ 0.5
Tmem40Q4FJU9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmem40Q4FJU9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tmem40Q4FJU9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmem40Q4FJU9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmem40Q4FJU9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmem40Q4FJU9 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.16■□□□□ 0.5
Tmem40Q4FJU9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmem40Q4FJU9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmem40Q4FJU9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmem40Q4FJU9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmem40Q4FJU9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmem40Q4FJU9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.15■□□□□ 0.5
Tmem40Q4FJU9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmem40Q4FJU9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tmem40Q4FJU9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmem40Q4FJU9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tmem40Q4FJU9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem40Q4FJU9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem40Q4FJU9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.14■□□□□ 0.49
Tmem40Q4FJU9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem40Q4FJU9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem40Q4FJU9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem40Q4FJU9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem40Q4FJU9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem40Q4FJU9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.14■□□□□ 0.49
Tmem40Q4FJU9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem40Q4FJU9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Tmem40Q4FJU9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmem40Q4FJU9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Tmem40Q4FJU9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Tmem40Q4FJU9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmem40Q4FJU9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmem40Q4FJU9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tmem40Q4FJU9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem40Q4FJU9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem40Q4FJU9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem40Q4FJU9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem40Q4FJU9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem40Q4FJU9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem40Q4FJU9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.12■□□□□ 0.49
Tmem40Q4FJU9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem40Q4FJU9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem40Q4FJU9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.11■□□□□ 0.49
Tmem40Q4FJU9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem40Q4FJU9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.11■□□□□ 0.49
Tmem40Q4FJU9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tmem40Q4FJU9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tmem40Q4FJU9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Tmem40Q4FJU9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.1■□□□□ 0.49
Tmem40Q4FJU9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tmem40Q4FJU9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmem40Q4FJU9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.1■□□□□ 0.49
Tmem40Q4FJU9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.1■□□□□ 0.49
Tmem40Q4FJU9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.1■□□□□ 0.49
Tmem40Q4FJU9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms