Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf44Q3UHJ8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf44Q3UHJ8 Gm13238-201ENSMUST00000117655 780 ntBASIC20.73■□□□□ 0.91
Rnf44Q3UHJ8 Gm43566-201ENSMUST00000196851 808 ntBASIC20.73■□□□□ 0.91
Rnf44Q3UHJ8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf44Q3UHJ8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf44Q3UHJ8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf44Q3UHJ8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf44Q3UHJ8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Rnf44Q3UHJ8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf44Q3UHJ8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf44Q3UHJ8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf44Q3UHJ8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf44Q3UHJ8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf44Q3UHJ8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf44Q3UHJ8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf44Q3UHJ8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf44Q3UHJ8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf44Q3UHJ8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf44Q3UHJ8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf44Q3UHJ8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf44Q3UHJ8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.71■□□□□ 0.91
Rnf44Q3UHJ8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf44Q3UHJ8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf44Q3UHJ8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf44Q3UHJ8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf44Q3UHJ8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.71■□□□□ 0.91
Rnf44Q3UHJ8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf44Q3UHJ8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf44Q3UHJ8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf44Q3UHJ8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf44Q3UHJ8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf44Q3UHJ8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf44Q3UHJ8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.7■□□□□ 0.9
Rnf44Q3UHJ8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf44Q3UHJ8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf44Q3UHJ8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf44Q3UHJ8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf44Q3UHJ8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf44Q3UHJ8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.69■□□□□ 0.9
Rnf44Q3UHJ8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf44Q3UHJ8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf44Q3UHJ8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rnf44Q3UHJ8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.68■□□□□ 0.9
Rnf44Q3UHJ8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf44Q3UHJ8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf44Q3UHJ8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.68■□□□□ 0.9
Rnf44Q3UHJ8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf44Q3UHJ8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.67■□□□□ 0.9
Rnf44Q3UHJ8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rnf44Q3UHJ8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf44Q3UHJ8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf44Q3UHJ8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf44Q3UHJ8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf44Q3UHJ8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf44Q3UHJ8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rnf44Q3UHJ8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf44Q3UHJ8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.67■□□□□ 0.9
Rnf44Q3UHJ8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf44Q3UHJ8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.66■□□□□ 0.9
Rnf44Q3UHJ8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.66■□□□□ 0.9
Rnf44Q3UHJ8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.66■□□□□ 0.9
Rnf44Q3UHJ8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf44Q3UHJ8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rnf44Q3UHJ8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf44Q3UHJ8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rnf44Q3UHJ8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf44Q3UHJ8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf44Q3UHJ8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.65■□□□□ 0.9
Rnf44Q3UHJ8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf44Q3UHJ8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rnf44Q3UHJ8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf44Q3UHJ8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf44Q3UHJ8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.65■□□□□ 0.9
Rnf44Q3UHJ8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.65■□□□□ 0.9
Rnf44Q3UHJ8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Rnf44Q3UHJ8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf44Q3UHJ8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Rnf44Q3UHJ8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf44Q3UHJ8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf44Q3UHJ8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.64■□□□□ 0.9
Rnf44Q3UHJ8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Rnf44Q3UHJ8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
Rnf44Q3UHJ8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf44Q3UHJ8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rnf44Q3UHJ8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf44Q3UHJ8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rnf44Q3UHJ8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf44Q3UHJ8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf44Q3UHJ8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.63■□□□□ 0.89
Rnf44Q3UHJ8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf44Q3UHJ8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf44Q3UHJ8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Rnf44Q3UHJ8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Rnf44Q3UHJ8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf44Q3UHJ8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rnf44Q3UHJ8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf44Q3UHJ8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf44Q3UHJ8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf44Q3UHJ8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms