Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Mmp25Q3U435 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.24■□□□□ 0.83
Mmp25Q3U435 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp25Q3U435 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Mmp25Q3U435 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp25Q3U435 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.24■□□□□ 0.83
Mmp25Q3U435 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp25Q3U435 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp25Q3U435 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp25Q3U435 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp25Q3U435 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp25Q3U435 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp25Q3U435 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Mmp25Q3U435 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp25Q3U435 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Mmp25Q3U435 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp25Q3U435 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp25Q3U435 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Mmp25Q3U435 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp25Q3U435 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Mmp25Q3U435 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp25Q3U435 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp25Q3U435 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp25Q3U435 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.22■□□□□ 0.83
Mmp25Q3U435 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp25Q3U435 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp25Q3U435 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Mmp25Q3U435 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp25Q3U435 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp25Q3U435 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp25Q3U435 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.21■□□□□ 0.83
Mmp25Q3U435 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Mmp25Q3U435 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.21■□□□□ 0.83
Mmp25Q3U435 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp25Q3U435 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp25Q3U435 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp25Q3U435 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp25Q3U435 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp25Q3U435 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Mmp25Q3U435 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp25Q3U435 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp25Q3U435 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp25Q3U435 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Mmp25Q3U435 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.2■□□□□ 0.82
Mmp25Q3U435 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp25Q3U435 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp25Q3U435 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp25Q3U435 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.2■□□□□ 0.82
Mmp25Q3U435 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Mmp25Q3U435 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp25Q3U435 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp25Q3U435 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp25Q3U435 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.19■□□□□ 0.82
Mmp25Q3U435 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Mmp25Q3U435 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp25Q3U435 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp25Q3U435 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp25Q3U435 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
Mmp25Q3U435 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.18■□□□□ 0.82
Mmp25Q3U435 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp25Q3U435 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp25Q3U435 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp25Q3U435 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp25Q3U435 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp25Q3U435 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Mmp25Q3U435 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp25Q3U435 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp25Q3U435 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp25Q3U435 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp25Q3U435 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.17■□□□□ 0.82
Mmp25Q3U435 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.17■□□□□ 0.82
Mmp25Q3U435 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Mmp25Q3U435 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Mmp25Q3U435 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp25Q3U435 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Mmp25Q3U435 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Mmp25Q3U435 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp25Q3U435 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.16■□□□□ 0.82
Mmp25Q3U435 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.16■□□□□ 0.82
Mmp25Q3U435 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp25Q3U435 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp25Q3U435 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp25Q3U435 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp25Q3U435 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp25Q3U435 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp25Q3U435 Gm15546-201ENSMUST00000122095 826 ntBASIC20.15■□□□□ 0.82
Mmp25Q3U435 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Mmp25Q3U435 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp25Q3U435 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Mmp25Q3U435 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Mmp25Q3U435 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.14■□□□□ 0.81
Mmp25Q3U435 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp25Q3U435 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp25Q3U435 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp25Q3U435 Gm10232-201ENSMUST00000089221 720 ntBASIC20.14■□□□□ 0.81
Mmp25Q3U435 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp25Q3U435 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp25Q3U435 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.13■□□□□ 0.81
Mmp25Q3U435 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Mmp25Q3U435 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms