Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Khdc4Q3TCX3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Khdc4Q3TCX3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Khdc4Q3TCX3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc4Q3TCX3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Khdc4Q3TCX3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc4Q3TCX3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc4Q3TCX3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc4Q3TCX3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc4Q3TCX3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Khdc4Q3TCX3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Khdc4Q3TCX3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Khdc4Q3TCX3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Khdc4Q3TCX3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.3■□□□□ 0.84
Khdc4Q3TCX3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.3■□□□□ 0.84
Khdc4Q3TCX3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Khdc4Q3TCX3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Khdc4Q3TCX3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Khdc4Q3TCX3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Khdc4Q3TCX3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Khdc4Q3TCX3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Khdc4Q3TCX3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.29■□□□□ 0.84
Khdc4Q3TCX3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Khdc4Q3TCX3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Khdc4Q3TCX3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Khdc4Q3TCX3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Khdc4Q3TCX3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Khdc4Q3TCX3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Khdc4Q3TCX3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Khdc4Q3TCX3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.27■□□□□ 0.84
Khdc4Q3TCX3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Khdc4Q3TCX3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.27■□□□□ 0.84
Khdc4Q3TCX3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Khdc4Q3TCX3 Gm10232-201ENSMUST00000089221 720 ntBASIC20.27■□□□□ 0.84
Khdc4Q3TCX3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Khdc4Q3TCX3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Khdc4Q3TCX3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Khdc4Q3TCX3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Khdc4Q3TCX3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Khdc4Q3TCX3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Khdc4Q3TCX3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Khdc4Q3TCX3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Khdc4Q3TCX3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Khdc4Q3TCX3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Khdc4Q3TCX3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Khdc4Q3TCX3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Khdc4Q3TCX3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Khdc4Q3TCX3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Khdc4Q3TCX3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Khdc4Q3TCX3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Khdc4Q3TCX3 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.24■□□□□ 0.83
Khdc4Q3TCX3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Khdc4Q3TCX3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.24■□□□□ 0.83
Khdc4Q3TCX3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Khdc4Q3TCX3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Khdc4Q3TCX3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Khdc4Q3TCX3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Khdc4Q3TCX3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc4Q3TCX3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc4Q3TCX3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc4Q3TCX3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Khdc4Q3TCX3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Khdc4Q3TCX3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc4Q3TCX3 Etf1-202ENSMUST00000180351 108 ntBASIC20.22■□□□□ 0.83
Khdc4Q3TCX3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc4Q3TCX3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc4Q3TCX3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc4Q3TCX3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc4Q3TCX3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Khdc4Q3TCX3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Khdc4Q3TCX3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Khdc4Q3TCX3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Khdc4Q3TCX3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.2■□□□□ 0.82
Khdc4Q3TCX3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Khdc4Q3TCX3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Khdc4Q3TCX3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Khdc4Q3TCX3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Khdc4Q3TCX3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Khdc4Q3TCX3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Khdc4Q3TCX3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc4Q3TCX3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.19■□□□□ 0.82
Khdc4Q3TCX3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Khdc4Q3TCX3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc4Q3TCX3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc4Q3TCX3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc4Q3TCX3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc4Q3TCX3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc4Q3TCX3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Khdc4Q3TCX3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Khdc4Q3TCX3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Khdc4Q3TCX3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Khdc4Q3TCX3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.18■□□□□ 0.82
Khdc4Q3TCX3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Khdc4Q3TCX3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Khdc4Q3TCX3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Khdc4Q3TCX3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Khdc4Q3TCX3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Khdc4Q3TCX3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Khdc4Q3TCX3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Khdc4Q3TCX3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms